Pairwise Alignments

Query, 382 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 6/156 (3%)

Query: 218 LAGTDALTGLDNRLSFMRAIEERVERGAAFSVLLADLDGFKQCNDQHGHQAGDVLLTSLG 277
           LA TD LTGL+NR +    +E R  R   FS+ L DL+GFKQ ND +GHQ GD +L  + 
Sbjct: 210 LALTDPLTGLENRTAMFAELE-RHRRSGGFSLFLLDLNGFKQINDTYGHQMGDAVLKQVA 268

Query: 278 GRLRALMPD-AVSIARLGGDEFA-LLHDAETDVDALHRRMPGIRQAIAAPVGWQG-RSLS 334
            RL   +P     + R+GGDEFA +L    +    + +RM  I+Q         G     
Sbjct: 269 YRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMMMQRM--IKQCFDHEFELSGDLRAK 326

Query: 335 VGGSFGIATFPQDGAEAAAVLHVADTRLYADKRQRK 370
           +  S G++T+P D    + ++H+AD  +Y  K  +K
Sbjct: 327 LNTSVGVSTYPLDSTNLSQLIHLADKNMYEMKFLQK 362