Pairwise Alignments

Query, 382 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 94.0 bits (232), Expect = 3e-23
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 4/165 (2%)

Query: 211  SQRELARLAGTDALTGLDNRLSFMRAIEERVERGAA----FSVLLADLDGFKQCNDQHGH 266
            ++ +L RLA  D LTGL NR  F   + + + R        +++  DLD FK  ND +GH
Sbjct: 1048 TEADLRRLANYDVLTGLPNRSLFAARLAKCIHRAEQTEDKLALIFLDLDRFKNVNDSYGH 1107

Query: 267  QAGDVLLTSLGGRLRALMPDAVSIARLGGDEFALLHDAETDVDALHRRMPGIRQAIAAPV 326
              GD LL     RL++ + +  ++ R GGDEF +L     D+D ++     + + I  P 
Sbjct: 1108 SMGDALLVEAASRLQSCVSENHTLCRFGGDEFVILMRDMVDIDEVNHLCEALIRQIEKPF 1167

Query: 327  GWQGRSLSVGGSFGIATFPQDGAEAAAVLHVADTRLYADKRQRKG 371
               GR   +  S G++ +P D  +   ++  AD  +Y  K + +G
Sbjct: 1168 ELYGREFFISTSIGVSLWPDDAKQPEVLIKNADQAMYHAKEEGRG 1212