Pairwise Alignments

Query, 970 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 892 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  176 bits (446), Expect = 6e-48
 Identities = 243/1016 (23%), Positives = 394/1016 (38%), Gaps = 191/1016 (18%)

Query: 8   LFLTGTALLTMASAAAAQEATPPTDAQSGQASAQDIVVTGTRIVRDGYTAPTPVTVASTE 67
           LF   T+ +  +  A A+E +   +          I VTG+RI +      +PVTV S  
Sbjct: 15  LFAAATSSIAFSGIAIAEEQSDKVER---------IEVTGSRIKQVDMETSSPVTVLSAA 65

Query: 68  ELVKATPSNIPDALNKLPQFQNSSSPSRSSMNFANTAAHGNVLNLRGVGPLRTLILFDGQ 127
           ++       + D LN      N+    R +  + + A+  + +N+RG+G   TL+L DG+
Sbjct: 66  DIALTGEKTVADVLNN--SSINAFGSWRGTSGYGSGASATSTVNMRGLGSQATLVLLDGR 123

Query: 128 RVAPTTYLG--TVDVNVIPNLLIQRVDVVTGGASAAYGSDAVSGVVNFVLDKKFTGLTGV 185
           R+  T+       D + IP  +++R++++  GASA YGSDAV+GV+N +  K+F G    
Sbjct: 124 RMPGTSSSSGAEADTSQIPLAIVERIEILRDGASAVYGSDAVAGVINIITKKEFDGFQ-- 181

Query: 186 AQGSTSQRGDNQG--YRFGIAGGFDFGGDRGHLLLSAETFKNNGMLRSD----RKLGRGA 239
              ST Q     G   RF IA GF+   ++G++  + E +    ++  D         G 
Sbjct: 182 VDFSTEQPSVEGGDANRFSIAAGFN--SEKGNVTFTYEYYDTKAVMDRDIWNMDDPSYGD 239

Query: 240 YSYVGSTVGCTNPNAAADPTACSPGGTLNPYMIASGVTLSAASEYGKITSGPFTNYRFDA 299
           YS   S                 P G  N                G+  +     Y F +
Sbjct: 240 YSSFSSV----------------PNGYYNT---------------GEKDADGDDIYAFYS 268

Query: 300 NGALVPFSNGTATGSPGYFVGGDGYAISPDTQAVAPLHTYQAFGRASWDFTPDVTGYVQG 359
           N  +   ++  A  + G   G   Y+    T+    +         ++D T ++    +G
Sbjct: 269 NSEMCADTDNVADTTDGQNNGRCLYSYGAVTKLFGDMTRNSFMTNFNYDITDNIRFRGRG 328

Query: 360 SFSRSDLSYTSLANSLVPPTAATLYSGNP----YLPAELQAAFSPTSQSITLARYGANSP 415
           + S S+ +              T Y+G P    Y        ++PT + +TL        
Sbjct: 329 TASLSETN--------------TRYAGTPVSTNYPVMSADNQYNPTGKDMTLYMRSVQIG 374

Query: 416 RPHTTERTDYWMVNAGFEGTLADKWKWNVAFNHGDSNFSVAQEGVWDWQHFYAATDAVRN 475
              T   T+ + +  GF G                  ++    G+ DW+      +A  +
Sbjct: 375 ERDTLTETNSFDILGGFVG------------------YADVGNGI-DWE-----LNAQHS 410

Query: 476 GSGQTVCRASLSADPTIAARY--ANCQPFNLLATGDAYASQPG-----YDYVVGTSRYRA 528
            S       +L  D  I +     N   FN   +G +YA         Y     T  Y+ 
Sbjct: 411 ASTTNAFNYNLINDNIIQSEIDTGNYDVFN--TSGMSYAEWEQQMTALYSAANHTGVYQG 468

Query: 529 RIWQNALSASIQGALFDLPAGPVDVALGAEYRRQSLRLTSNANPADL---------DTTA 579
           +     +       L++     + +  G EY   + + TS+   A           D  A
Sbjct: 469 KFDSTQIDGLASTMLYEQGDFSLAIVGGLEYEMINFKQTSDPESASGIISGGSGGDDVDA 528

Query: 580 ER---SAYFAGLRGVPSSVYHYWLTNVGEASGDLSVKEVFGELAVPLLKDQPFAQELSLN 636
           ER   SAY      +P             A+ +LS            L+ + + QE +L 
Sbjct: 529 ERTRQSAYTEIQMALP-------------ANFELSAA----------LRYERYEQEGTLT 565

Query: 637 AA-GRYTDYSTSGSVKTWKLGATWKPISDLLLRGSVSRDIRAPNLFELFAGDQSAISLLV 695
            A G+ T+ ST  +V   K G +W+P+  LLLR S     RAPN+ E+F+    +     
Sbjct: 566 GAEGQVTNSSTFDAVVP-KFGLSWRPVDSLLLRASYGDSFRAPNMGEMFSSQSLSFEKAY 624

Query: 696 DPVSGITANVPQVT------------GGNPDLKPEKADTLTFGAV--ITPSFLPGLSLSV 741
           D V     N                 GGNP+L+ E+ ++LT G V  +T ++    S+ +
Sbjct: 625 DSVWCEANNNSDANYCATGNQHKTWFGGNPNLEAEEGNSLTLGGVWNVTDAW----SVEL 680

Query: 742 DYYRIKIKDAIGTLSLTQIVNNCSQSGGTAPECALVTRDTPTSFPSQIRVAPANIAFLET 801
            YY I   + I  +S + ++ +   +GG+      VTR  P      +     N A LET
Sbjct: 681 SYYSITYDNKIEAVSASDVIRDEKINGGS----DFVTRG-PDGKIEYLESGYVNKASLET 735

Query: 802 SGIDFDASYRTELAGGNLGLRLYASYLDTYQTQQSSTAPVLEYAGTSTISSTPEGRPRWR 861
           SG DF +SY  E   G+  L+L  +++  ++ Q  + +  ++Y+GT       +  P WR
Sbjct: 736 SGFDFASSYNFETGFGDFNLKLDVTHILDFKEQADAESEKIDYSGT-------QDYPDWR 788

Query: 862 GTLSVNYEIGRVGVFLNQQLIGKVKLGIPGGLENGLGQTIGAVDYTDMTLSY---RLPVA 918
           G  +  +             IG       G +   LG      DY   T SY      V 
Sbjct: 789 GNFAAAWYYNDFSAAWTTVYIGSQS----GAMWRDLG-----YDYIIDTPSYFKHNFQVG 839

Query: 919 NGHVEFFGT----VNNLFDKDPPLIPGTIPGVNIATNFALYDTVGRAFTGGIRFKF 970
             H ++ GT    VNNLFD+  P         ++ TN  LYD +GR F   I  KF
Sbjct: 840 YTH-DWNGTITVGVNNLFDEKAPTWYDYAGYRDVNTN--LYDVLGRTFYLRINQKF 892