Pairwise Alignments

Query, 700 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 855 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  165 bits (417), Expect = 1e-44
 Identities = 203/801 (25%), Positives = 315/801 (39%), Gaps = 164/801 (20%)

Query: 39  SFGVPHIYAKTEEGGFYGFGYAQAQSHGNLLLRMYGESRARAAEYWGEKYE--------- 89
           ++GVPHI A   E   +G GYAQAQ +  +L   + ++ ++ + Y+G             
Sbjct: 54  TYGVPHIQADNLESLGFGSGYAQAQDNLCVLADGFVKANSQRSMYFGPHASIDFTTGQPT 113

Query: 90  SQDKWLVANDVPARSAQWFRQQT----PQMQKN----LEAFAAGVNAYAA--------AH 133
           ++D   + +D  A  A   R+Q     PQ  +     ++ F AG N Y A        A 
Sbjct: 114 AEDNGNLISDF-AYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQYLADVEAGKQTAE 172

Query: 134 P--------DRIAPEVKVVLPLRGVDIIAHAQRLMNFGYIAS------------------ 167
           P          I PE  VV  L  + ++  A   ++  + A+                  
Sbjct: 173 PFCGGQPWVKPIVPE-DVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQ 231

Query: 168 ---------DRKVL------TDPSINEAG-GSNAWAVAPSRSASGKAMLLANPHLPWAPS 211
                      K+L      T P  N    GSN W +   ++ +G+ M+L NPH P    
Sbjct: 232 EQTAFVSDMQSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHT-G 290

Query: 212 QLTYYEAQITAPG-LAIYGATQVGLP-VLRFGFNNDLGFTNTVNTMQGFTSYKL-VPEGD 268
            L ++++ IT PG L + G + VG+P  +  GFN DL +T+T +T + F  Y L +  GD
Sbjct: 291 NLRFWQSHITIPGQLDMMGGSLVGMPGPINIGFNKDLAWTHTFSTAEHFVMYNLELVSGD 350

Query: 269 --GYRFDGKTLPFDTVTKSYKVKQADGTLKSVSFEQKSTVHGPVFTLP--------DGKT 318
              Y FDG+ +P +  T S  V      +     +  +T  GP+   P        D  +
Sbjct: 351 RLQYLFDGQPMPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPSLAPFGWDDGS 410

Query: 319 TVALKVAGLDRPGVLEQYLEMGKARDWGAFEKALRKMQVVMF-NIIYADRAGHILYLDNG 377
              ++ A +     ++ +L M  A +   F++A +    V+F N +YAD+ G+  Y+D+ 
Sbjct: 411 AFMIQDANMATMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDS 470

Query: 378 LLP---------KHASGDLKYWSAP-----VPGDTSATLWKDVHSYDDMPKLLDPATGFV 423
            +P            S D+K          +PG+TS   +     Y+  PKL    + FV
Sbjct: 471 TVPGLSEAAVVVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKL--ERSDFV 528

Query: 424 QNANDPPWLATWPRALDPKSFPAYVAPVGPMSQRAQMSVKLMSQTP----KISFDDFVSR 479
           QN+ND  W       L   S P Y    G +S R +M + LM        K + ++  + 
Sbjct: 529 QNSNDSFWSTNLNEPLTYFS-PMYGPEAGQLSLRTRMGLTLMQDAAGSDGKFNLEELEAA 587

Query: 480 KLTTTSLMAERMLPDLLA--AAAGSNDAEVQA--------ATALLKGWDHRFEPDSRAAL 529
            L+  S +AE +LPDL+A   A GS    V A        A A LK W+ + + DS+   
Sbjct: 588 VLSNRSYLAELVLPDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQDNDSKGGA 647

Query: 530 LFETWAGLFAPKNFT----DQSNYAVKWTLDDPLETPRGLKDPTAAVAMLKEAVAKTKQL 585
           L   +A  F+ K       D +N A          TP  L    +A+  L  A    +  
Sbjct: 648 LLREFAHQFSQKTMLTKGFDPANAAT---------TPNTLTTDGSALVALAHAALNLEAA 698

Query: 586 YGAIDRPFGDVSRFH-------IGDVSVPANGGFGNTGVFRTITWGPMKNGERTPVH--- 635
             A+D P GDV                +P  G     G F   +     +    P H   
Sbjct: 699 GFALDAPLGDVQFVEKSLPDGTASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYA 758

Query: 636 ------------------------GETWVSMVEF-GTPMKAVGLMSYGNSSQPGSWHNSD 670
                                   G +W+  V F      A G+++Y  SS   S   +D
Sbjct: 759 PLMDVATGKAMASGMTAKGYQIRYGSSWMMAVSFTDEGPVARGILTYSESSNILSPSFTD 818

Query: 671 QLQLLADKK-FRTLWISRADV 690
           Q  L +  K FR L    AD+
Sbjct: 819 QSNLYSSSKTFRPLLFKEADI 839