Pairwise Alignments

Query, 943 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 890 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 77.4 bits (189), Expect = 4e-18
 Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 23/210 (10%)

Query: 102 LSAQAHKSRAVEVASLGVTALPFAMQASTVPQASTAAAEEAPGPAIVVTGSRGQARTVTD 161
           ++ Q   +RAV  + L   AL     +  V  A  AA  +     I VTGSR + RT  +
Sbjct: 1   MTTQTTVARAVRFSLL---ALVSTSLSPLVFAADEAAVIDDKVERIEVTGSRIK-RTDLE 56

Query: 162 SPTPIDVISGADLTRTGKAGVFQALNTLVPSFNLPVRAGGATSTVIATG--------GLR 213
           + +PI V+S AD+ + G   V   L       NL   +GG+ +     G         LR
Sbjct: 57  NASPIVVVSAADIEKGGFNSVQDVLG------NLSQNSGGSMTQQEVHGFTPAASAVNLR 110

Query: 214 GLNPDQALILVNGKRRHKTSLINAVSTLYNGSVPADLDMIPTAAVDHIEVLRDGAAAQYG 273
           G+   + L L+NGKR  K       +  +      D   IP  A++ IE+L  GA+A YG
Sbjct: 111 GVGAGRVLTLINGKRVPKYPFGAGGTDSF-----VDTANIPLGAIERIEILTTGASAIYG 165

Query: 274 SDAIAGVINIILKDDSSGGSANFTAGQNFD 303
           SDA+ GVINIILK D    +  +     FD
Sbjct: 166 SDAMGGVINIILKKDVEQSTFKYRHSDTFD 195



 Score = 54.3 bits (129), Expect = 3e-11
 Identities = 83/349 (23%), Positives = 139/349 (39%), Gaps = 30/349 (8%)

Query: 569 GDAAYMSRDNVSLYADVAWDPNKDITIGAAARFEHYDDGS--GNTLIWKVNGRYAATDWI 626
           G +A   R+  + YA+VA    +++T+  A R+++YDD S  G     +V   Y   D +
Sbjct: 530 GSSAQGEREQYAGYAEVAVPVIENLTVTLAGRYDYYDDLSDVGGQFSPQVAVEYRPIDNL 589

Query: 627 AFRAAANTGFRAPAVAQQIYTQTTNQFRTVNGVPNQLLQIKT---LAVDDPAAIALGAKP 683
             R      FRAP + Q+++ + T  + TV   P       T       D   I +GA P
Sbjct: 590 LLRGLYAETFRAPDM-QRLFGEPTAAYSTVIDTPTCEAAGGTGPACEKIDSLPITIGANP 648

Query: 684 -LQPETSFNISAGVVLTPLPNFNLTIDAYQIDVDDRITITSTLTGTAISNILLASGVPEA 742
            L+ ET  N + G+V     + NLT+D + +++D+ +   S       S+        +A
Sbjct: 649 ELEAETGKNYNLGMV-WDYNDLNLTLDYWIVEIDNLVNSPSAQYILDHSDAFADKIFRDA 707

Query: 743 EARTLTAQYYTNAID---TRTRGIDVVASYKHGLFDTVNMQWNLGFNYNKTKITHIIDNP 799
             + +  Q  T AI+     T GID    Y++      ++   L       + T+++   
Sbjct: 708 SGKLI--QVNTQAINMSSQETSGIDFSVGYRYETSGYGDLSARL-------EGTYLLKWE 758

Query: 800 PELAALGSDYVLFDRARRSNMTNNLPRTKLSISNLAT--MGDFTLSSRLTRFGGFKSYQN 857
            +L        L D    +           +  N AT  +  +T S    R   F    N
Sbjct: 759 EQLTPDSEPLDLIDGDGSAPQIRGNLNLGWNFDNFATNLLIKYTDSMNGQRKEAF--INN 816

Query: 858 GVTSNGVTTYPNDRSYGAKWITDLEASWQVTPLVNIAIGANNIFNVYPD 906
           G+      T   D      W     AS+ +T  +  + G NNIF+  P+
Sbjct: 817 GLADKYAVTI--DSHVEVNW----AASYMLTDAIKFSGGINNIFDAGPE 859