Pairwise Alignments

Query, 193 a.a., Transcriptional regulator, AraC family from Sphingobium sp. HT1-2

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 30  QMLLHRDPNRADLCLDQLRDLLRQGTDAD--------DGAVMLARRPDSHCSPPTGGLAG 81
           + L+ +DP      L QL  LLRQ   +          G   L  R      P    L  
Sbjct: 110 EQLIVQDPTLFH-SLQQLHHLLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQ 168

Query: 82  WQLRKVTAYVETRLGRTLVTEELALVASLSPGHFCRAFKVSMGETPHAYVIRQRIRRAQR 141
             L  +  +V ++L + +  E+LA +  LSP  F R FK   G TP+A++ R R+ +A +
Sbjct: 169 HNLALLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMK 228

Query: 142 LMLETGHSLSDIASACGLTDQAHLTRLFKRLVGTTP 177
           L L++G   +D+A   G  DQAH ++ FK   G +P
Sbjct: 229 L-LQSGKPGTDVAYQVGFYDQAHFSKAFKATYGLSP 263



 Score = 23.1 bits (48), Expect = 0.005
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 150 LSDIASACGLTDQAHLTRLFKRLVGTTPLSWRR 182
           L  +A  C L+      R FK   G TP +W R
Sbjct: 188 LEQLAQLCQLSP-TQFQRHFKAQTGLTPYAWLR 219