Pairwise Alignments

Query, 371 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 521 a.a., cytochrome c oxidase, subunit II (RefSeq) from Shewanella loihica PV-4

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 40/251 (15%)

Query: 47  LISTALMLLIVIPVMALVVYFAWRYRAANKAVEK-EYDPDWDHSTKLELLIWSAPLLIII 105
           + S  + +L +   + LVV+    Y   N    K     ++  STK+E+     P +I+I
Sbjct: 37  VFSLHMTILYICCAIGLVVFGVMIYAIINHRRSKGAVAANFHESTKVEIAWTLVPFVILI 96

Query: 106 CLGALTWVSTHKLDPYRPLDRIDAQTAIDPKVKPLVVQVVALDWKWLFIYPEQGI----- 160
            +      +   ++              DP    L +++    WKW + Y +Q I     
Sbjct: 97  LMAIPATKTLIAME--------------DPSNADLTIKITGSQWKWHYSYFDQDISYYSL 142

Query: 161 -ATVNE-------------------MALPTNVPVRFDITASTVMNSFYIPELAGQIYAMP 200
            AT  E                   + LP N  +RF +T+  V++S+++P  A +  A P
Sbjct: 143 LATPREQIEGKETKGEHYLLEVDKPLVLPVNRKIRFLMTSEDVIHSWWVPAFAVKKDANP 202

Query: 201 GMKTQLHAVANKPVTGTGFSANYSGAGFTHMRFGYKALDQAGFDAWVAKVKASNASLDRN 260
           G   +     +KP    G  A   G     M    + L +A FD W+ + +A  ++    
Sbjct: 203 GFINEAWTRIDKPGIYRGQCAELCGKDHGFMPIVVQVLSEADFDNWIVEQEAQASAAAAE 262

Query: 261 VYLNLAKPSEK 271
               L+K   K
Sbjct: 263 AQAALSKTLSK 273