Pairwise Alignments

Query, 240 a.a., FOG: TPR repeat, SEL1 subfamily from Sphingobium sp. HT1-2

Subject, 693 a.a., Sel1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 4/181 (2%)

Query: 34  ADAGLPDAQAYYGQLLLDGLGVAADPAKAFRQFGLAAASGHVMAINMVGRCHEKGWGTPV 93
           ADAG   AQ     L  DG+    DP +      LA    H  A   +   ++ GW    
Sbjct: 214 ADAGDASAQYNLATLYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFGWFVEQ 273

Query: 94  DPVAAAACYRRAAEAGLDWGMYNWGSALGLGAGVAQDEQAALGWFQKAAALGHAKSINFL 153
           D   A   Y+RAAE G    M N  +    G  V QD   AL  +Q AA   +A ++N +
Sbjct: 274 DKKLAIQLYQRAAELGDAGSMVNLATFFESGQFVPQDIDMALQLYQLAAQQNNALALNNM 333

Query: 154 GAFHEEGRLLPRDLPRAAECYRIAAEGGDFRGQFNHGRLLADAGNI----AAATHWMQTA 209
            + +  G  + R+     E +  AA   + +  +N G +  D   +    A A  + Q A
Sbjct: 334 ASIYFNGEYVERNTELGLELFNKAATMNNTQALYNLGIIYRDGNTVKRDRAKALSFFQQA 393

Query: 210 A 210
           A
Sbjct: 394 A 394



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 95  PVAAAACYRRAAEAGLDWGMYNWGSALGLGA-GVAQDEQAALGWFQKAAALGHAKSINFL 153
           P  A   Y+ AA  GL       G    +GA G  +D + A  W+ KAA     +++  L
Sbjct: 62  PEKALKLYQEAANEGLPRAQSELGLIYDVGALGTKEDNELAFKWYLKAAKQKDTQALINL 121

Query: 154 GAFHEEGRLLPRDLPRAAECYRIAAEGGD 182
            AF+  G  + +DL +A + YR A    D
Sbjct: 122 AAFYRNGEFVEQDLDQAIDYYRQAISLND 150



 Score = 40.8 bits (94), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 1/96 (1%)

Query: 116 NWGSALGLGAGVAQDEQAALGWFQKAAAL-GHAKSINFLGAFHEEGRLLPRDLPRAAECY 174
           N G    LG GV QD + A+  +Q A    G A ++  L   + EG  +P D        
Sbjct: 583 NLGEMYRLGLGVEQDIEQAISLYQSAVEWHGQATAMLNLSELYLEGEGVPVDEKLGLSWL 642

Query: 175 RIAAEGGDFRGQFNHGRLLADAGNIAAATHWMQTAA 210
           + AAE  +   Q+  G+ L D    +A   WM  +A
Sbjct: 643 KKAAETDNSEAQYRLGKYLLDRNVTSAGKIWMSRSA 678



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 13/197 (6%)

Query: 5   SPLLSQTADQMRDQL--AASPESAAALIRAGADAGLPDAQAYYGQLL-LDGLGVAADPAK 61
           S L S+    +  QL  +A PE A  L +  A+ GLP AQ+  G +  +  LG   D   
Sbjct: 42  STLTSENKLTLAKQLYESAQPEKALKLYQEAANEGLPRAQSELGLIYDVGALGTKEDNEL 101

Query: 62  AFRQFGLAAASGHVMAINMVGRCHEKGWGTPVDPVAAAACYRRAAEAGLDWGMYNWGSAL 121
           AF+ +  AA      A+  +   +  G     D   A   YR+A            G  L
Sbjct: 102 AFKWYLKAAKQKDTQALINLAAFYRNGEFVEQDLDQAIDYYRQAISLNDPIAFCELGF-L 160

Query: 122 GLGAGVAQDEQAALGWFQKAAALGHAKSINFLGA---FHEEGRLLPRDLPRAAECYRIAA 178
            L   + +D Q A   F   A     ++  +LG    FH E   + + L    + Y++AA
Sbjct: 161 YLDEPLKKDLQLAETNFLLGA--NQQQTSCYLGLAYLFHFEKDKVKQSL----KWYQLAA 214

Query: 179 EGGDFRGQFNHGRLLAD 195
           + GD   Q+N   L  D
Sbjct: 215 DAGDASAQYNLATLYFD 231



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 1/149 (0%)

Query: 26  AAALIRAGADAGLPDAQAYYGQLLLDGLGVAADPAKAFRQFGLAAASGHVMAINMVGRCH 85
           A +  +  AD GL  A    G+    GLG   +   A   + L +A+ + +A + +G  +
Sbjct: 386 ALSFFQQAADLGLERAYFEVGKAYHLGLGTEKNDQLAL-PYLLKSANNNSLATHYLGVIY 444

Query: 86  EKGWGTPVDPVAAAACYRRAAEAGLDWGMYNWGSALGLGAGVAQDEQAALGWFQKAAALG 145
            K      D   A   + +A   G      + G     G+    D   A+ W++K     
Sbjct: 445 YKSDLIEHDIDKAITYFEKAYSQGEIDPTASLGQIYEFGSPSHHDVDLAIAWYKKGIKGE 504

Query: 146 HAKSINFLGAFHEEGRLLPRDLPRAAECY 174
           H  +   L   +  G  + +++    E Y
Sbjct: 505 HPYAYMRLALLYMNGEGVAKNMQHGLELY 533