Pairwise Alignments

Query, 454 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Sphingobium sp. HT1-2

Subject, 434 a.a., survival protein surA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 68  VNGRIITGTDVDQRLALI-ITANGGKVSAEEKERLRVQVLRNLIDETLQIQEAAANDIKI 126
           +N  I+  +++   +  +   A     S      LR QV+  LI   LQ+Q A    + I
Sbjct: 34  INDGIVLESEITNMIDTVKANAKAANQSLPSDSALRTQVIERLILTRLQLQMADRIGLHI 93

Query: 127 DPAEVNQSYERVAANFRKSPPQFDQYLREQGSSASSIKRQIEGELAWSRLLRRNIQPFVN 186
              +++Q+ E +A   + +  Q  Q +  +G S S  + Q+  E+    + R  +Q  + 
Sbjct: 94  GDLQLDQAIENIAREQKMTVAQMQQKIASEGISFSQYREQLREEITLGEIQRIQVQRRIQ 153

Query: 187 VSEDEVKSVVDRLNAAKGSD-EVRISEIYL----SSTPENRDQITANARNIIEQIKQGGS 241
           VS  E+  +V  +      D E +I  I +    + T E  +  +  A  ++E++K G  
Sbjct: 154 VSPQEITGLVKLIQEQGMKDVEYQIGHILIDVPNNPTSEQLEASSKRANAVLERLKSGED 213

Query: 242 FAAYARQFSEASTAVVGGDLGWVRPSQLPTELAQAATELQVGQLAGPIETVGGMSIIYVM 301
           F   A   S    A+ GG   ++  +++PT  A+     + G + GPI+T  G  II +M
Sbjct: 214 FRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAKKGDIIGPIKTGAGFHIIKIM 273

Query: 302 DKRKVLTAD 310
           D R + T +
Sbjct: 274 DARGLQTKE 282



 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 203 KGSDEVRISEIYLSSTPE-NRDQITANARNIIEQIKQG-GSFAAYARQFSE-ASTAVVGG 259
           K  +EVR   I L  +P  + D+  A     ++QI+ G   F   ARQ+SE   +A  GG
Sbjct: 281 KEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKFEDLARQYSEDPGSATKGG 340

Query: 260 DLGWVRPSQLPTELAQAATELQVGQLAGPIETVGGMSIIYVMDKRKVLTAD 310
           +LGW  PS    E AQ    L   Q++ P  T  G  I  + ++RK    D
Sbjct: 341 ELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATD 391