Pairwise Alignments

Query, 454 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Sphingobium sp. HT1-2

Subject, 434 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella sp. ANA-3

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 8/250 (3%)

Query: 68  VNGRIITGTDVDQRLALI-ITANGGKVSAEEKERLRVQVLRNLIDETLQIQEAAANDIKI 126
           +N  I+  +++   +  +   A     S      LR QV+  LI   LQ+Q A    + I
Sbjct: 34  INDGIVLESEITNMIDTVKANARAANQSLPSDSALRTQVIERLILTRLQLQMADRIGLHI 93

Query: 127 DPAEVNQSYERVAANFRKSPPQFDQYLREQGSSASSIKRQIEGELAWSRLLRRNIQPFVN 186
              +++Q+ E +A   + +  Q  Q +  +G S S  + Q+  E+    + R  +Q  + 
Sbjct: 94  GDLQLDQAIENIAREQKMTVAQMQQKIESEGLSFSQYREQLREEITLGEIQRIQVQRRIQ 153

Query: 187 VSEDEVKSVVDRLNAAKGSD-EVRISEIYLSSTPEN--RDQITANARN---IIEQIKQGG 240
           VS  E+  +V  +      D E +I  I L   P N   +Q+ A+++    ++E++K G 
Sbjct: 154 VSPQEITGLVKLIQEQGMKDVEYQIGHI-LIDVPNNPSSEQLEASSKRANAVLERLKSGE 212

Query: 241 SFAAYARQFSEASTAVVGGDLGWVRPSQLPTELAQAATELQVGQLAGPIETVGGMSIIYV 300
            F   A   S    A+ GG   ++  +++PT  A+     + G + GPI++  G  II +
Sbjct: 213 DFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAKKGDIIGPIKSGAGFHIIKI 272

Query: 301 MDKRKVLTAD 310
           MD R + T +
Sbjct: 273 MDARGLQTKE 282



 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 203 KGSDEVRISEIYLSSTPE-NRDQITANARNIIEQIKQG-GSFAAYARQFSE-ASTAVVGG 259
           K  +EVR   I L  +P  + D+  A     ++QI+ G   F   ARQ+SE   +A  GG
Sbjct: 281 KEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKFEDLARQYSEDPGSATKGG 340

Query: 260 DLGWVRPSQLPTELAQAATELQVGQLAGPIETVGGMSIIYVMDKRKVLTAD 310
           +LGW  PS    E AQ    L   Q++ P  T  G  I  + ++RK    D
Sbjct: 341 ELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATD 391