Pairwise Alignments

Query, 358 a.a., Outer membrane protein A precursor from Sphingobium sp. HT1-2

Subject, 356 a.a., porin OmpA from Klebsiella michiganensis M5al

 Score =  106 bits (265), Expect = 8e-28
 Identities = 104/359 (28%), Positives = 157/359 (43%), Gaps = 52/359 (14%)

Query: 1   MRKLALAAALATSALATPALA--RDNSWYVGVDAGVMIVEDQDIT---FTPGNGTVASNT 55
           M+K A+A A+A +  AT A A  +DN+WY G   G     D       F   NG V ++ 
Sbjct: 1   MKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGFYGNGFKGNNGPVRNDQ 60

Query: 56  VAADYHKGYDFDANIGYDFGGFRLEAEAAYKRAKVDLDDSGFGGAASALSFMLNGLLDFG 115
           + A    GY  +  +G++ G +      AYK   VD       GA  A    L   L + 
Sbjct: 61  LGAGAFGGYQVNPYLGFEMG-YDWLGRMAYK-GSVD------NGAFKAQGVQLTAKLGYP 112

Query: 116 PDDGLQGF--VGGGV--GVSRGKLANDLVNDS--DTGFAWQAIAGVRYPVTNNVDVSLKY 169
             D L  +  +GG V    S+G  A+  V+ S  DTG +     G+ + VT ++   L+Y
Sbjct: 113 ITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGLEWAVTRDIATRLEY 172

Query: 170 RFFNQDDIKLIPAYTTIGGPAGSEASTKLRTHSLLLGLTYNFGAPAEPAPPPPPPPPPPP 229
           ++ N              G AG+   T+     L LG++Y FG                 
Sbjct: 173 QWVNNI------------GDAGT-VGTRPDNGMLSLGVSYRFGQD-------------DV 206

Query: 230 PPPPPPPPPPAPECSPGPYI----VFFEWDKSDITPDAATILDNAVSAYSACG--NAQVM 283
            P   P P PAPE +   +     V F ++KS + P+    LD   +  S     +   +
Sbjct: 207 APVVAPAPAPAPEVTTKHFTLKSDVLFNFNKSTLKPEGQQALDQLYTQLSNMDPKDGSAV 266

Query: 284 LAGHADRSGAASYNVGLSQRRADAAKAYLASKGIPDGVMTTQAFGESKPRV-DTADGVR 341
           + G+ DR G+ +YN  LS++RA +   YL SKGIP   ++ +  GES P   +T D V+
Sbjct: 267 VLGYTDRIGSDAYNQQLSEKRAQSVVDYLVSKGIPASKISARGMGESNPVTGNTCDNVK 325