Pairwise Alignments

Query, 526 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 479 a.a., cytochrome bd quinol oxidase subunit 1 apoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  233 bits (595), Expect = 9e-66
 Identities = 118/314 (37%), Positives = 185/314 (58%), Gaps = 7/314 (2%)

Query: 1   MISMAVVELSRLQFALTALYHFLFVPLTLGLSFMLVIMESVYVMTDRPIWRDITRFWGKL 60
           M  +  ++L+R+QFA T  +H LF  +T+GL+  L ++E +++ T   ++RD+  FW K+
Sbjct: 1   MFGLEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKI 60

Query: 61  FGINFVLGVATGLTMEFEFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLMFFGW 120
           F +NF +GV +GL M ++FGTNW+ +S + G + G  L  E L AFFLEA F+G+M FGW
Sbjct: 61  FAVNFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGW 120

Query: 121 DRLSKRGHLLTTFMVALGSNLSALWILVANGWMQHPTGATFNPQTMRMEVTDFMAVIFNP 180
           +R+ +  H  +T MVA+G+ +S  WIL +N WMQ P G  F     R+  TD+ AV+FNP
Sbjct: 121 NRVGRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQG--FEIIDGRVIPTDWFAVVFNP 178

Query: 181 VAQAKFVHTVSAGYVCASVFVLGVSAFYLLKGKHIAIAKRSFTVAAAFGLAASLSVVVLG 240
               +  H   A +V  + FV   +A++LL+G+     ++  ++A    L  +    V+G
Sbjct: 179 SFPYRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVG 238

Query: 241 DESGYALTENQKMKLAAIEGMWQT---EPAPAGLTLFGLPSNSGRETTHEIKVPYVLGLI 297
           D  G    ++Q  K+AAIEG W+    EP P  L LFG+P      T + +++PY+  LI
Sbjct: 239 DFHGLNTLKHQPAKIAAIEGHWENVGDEPTP--LILFGIPDMKEERTKYAVEIPYLGSLI 296

Query: 298 STRSLTGEVTGINQ 311
            T SL  +V  + +
Sbjct: 297 LTHSLDKQVPALKE 310



 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 12/144 (8%)

Query: 383 PNVPAIFWMFRIMAGLGFAFIALFAIAFAFSSMRR---FDARWFLKLALFMMPMPWIAIE 439
           PN   +FW FR+M  LG   I  F   ++    +R   +++R FL LAL+M P   IAI 
Sbjct: 317 PNSTIVFWSFRVMVALGMLMI--FTGLWSLWLRKRGTLYNSRPFLYLALWMGPSGLIAIL 374

Query: 440 VGWAVAEIGRQPWAVDGVLPTFLAASSLTVPQLWTTIIGFTLLYGILAVIEVKLMLATIA 499
            GW   EIGRQPW V G++ T  A+S  +V Q+  T++ F ++Y +L    +  M+  + 
Sbjct: 375 AGWFTTEIGRQPWVVYGLMRTADASSGHSVAQMSITLVLFVVVYFVLFGTGLGYMMRLVR 434

Query: 500 KGPERYV-------PWRPDSPAEP 516
           KGP+ YV       P +  +PA P
Sbjct: 435 KGPKAYVEHVPHGGPGQQRTPARP 458