Pairwise Alignments

Query, 541 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 606 a.a., DNA polymerase III subunit tau from Phaeobacter inhibens DSM 17395

 Score =  460 bits (1184), Expect = e-134
 Identities = 267/579 (46%), Positives = 345/579 (59%), Gaps = 51/579 (8%)

Query: 8   YRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTARLIAKAL 67
           Y+VLARKYRP  F +L+GQDAMV+TL NA    R+A AF+MTG+RG GKT+TAR+IAK +
Sbjct: 14  YQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTARIIAKGM 73

Query: 68  NCIGPDGQGGPTIDPCGVCEPCMAIAEGRHIDVVEMDAASHTGVDDVREIIEAVRYAAVS 127
           NCIG DGQGGPT +PCG CE C AI EGRH+DV+EMDAAS TGV D+REII++V+Y A S
Sbjct: 74  NCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDIREIIDSVQYRAAS 133

Query: 128 ARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRR 187
           ARYKIYIIDEVHMLS +AFNALLKTLEEPPAHVKF+FATTE+ KVPVTVLSRCQRFDLRR
Sbjct: 134 ARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRR 193

Query: 188 IPAEMLAGHFAHVVEAEKVAAEPDALSLIAQAAEGSARDGLSILDQAIAHAEMGEGEPMV 247
           I  E++ G    +  AE      DAL+LI +AAEGSARD  S+LDQAI+H   G GE   
Sbjct: 194 IEPEVMIGLLQKIAGAENAQIAEDALALITRAAEGSARDATSLLDQAISH---GAGE--T 248

Query: 248 TAAQVREMLGLSDRGSTRRLLGLLLEGDTAALLGGVRDQYALGVEPLSLMRGLLELVHAV 307
           TA QVR MLGL+DRG    L+ ++L GD AA L  +  QYA G +PL+++R L E+ H V
Sbjct: 249 TADQVRAMLGLADRGRVLDLIDMILRGDAAAALTELSAQYAEGADPLAVLRDLAEITHWV 308

Query: 308 TLVKAGRDIA-TPGQSDEERGALADWASQIGFGPLHRLWQLMLKGHDEVATAALPIEACE 366
           ++VK   D A  P  S +ER   +  A  +    L R+WQ++LK  +EVA A   + A E
Sbjct: 309 SVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKALEEVAAAPNAMMAAE 368

Query: 367 MALLRVMHAATMPDPSDLARML-------------------------------------- 388
           MA++R+ H A +P P  L R L                                      
Sbjct: 369 MAVIRLTHVADLPTPEQLMRTLQDTPPPPPPSGHMNAPMGSSGGPSGAPQGAGGYVPQQP 428

Query: 389 --QGGVPT---AAPAMLGQASAAAAPAPEPASSLP--ATFEDLIEAFWQKSKGHLAQEMH 441
             QGG+P+     P M      A A AP+  S+L    +FE +IE    K  G L + + 
Sbjct: 429 GPQGGMPSGPQGGPTMSTGNGQATALAPQVDSALARYPSFEHVIELIRVKRDGLLLEYVK 488

Query: 442 DCVGIIRYDPPMLEYRGTASLSPDFATRIIPALREVTGVAWTVTQGEGEAKPTLLANEQR 501
             + ++ Y P  +  + T     D A R+   L+  T   W ++        T+   +  
Sbjct: 489 TYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTHARWVISLANEGGGETITERDNA 548

Query: 502 QLADSRAAILETPVVKAAMDAFPDAELVHSDEPEQWSAE 540
                RA     P+V+A +++FP A++ H    E  +AE
Sbjct: 549 AENALRAEASTHPMVQAVLESFPKAKIRHIRTAEDLAAE 587