Pairwise Alignments

Query, 541 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 27/225 (12%)

Query: 14  KYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTARLIAKALNCIGPD 73
           KYRP    E++G   +++ L N + +  + H  L +G  GVGKT+ A  +AK L      
Sbjct: 8   KYRPETLSEVVGHHEIIKRLTNYVEKKSMPH-LLFSGSPGVGKTTAALALAKDL------ 60

Query: 74  GQGGPTIDPCGVCEPCMAIAEGRHIDVVEMDAASHTGVDDVR-EIIEAVRYAAVS-ARYK 131
                               +    + +E++++   G+D +R ++ +  R   +  A +K
Sbjct: 61  ------------------YGDTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFK 102

Query: 132 IYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRRIPAE 191
           +  +DE   L+ +A NAL +T+E+     +F+ +    +K+   + SRC  F    +  E
Sbjct: 103 VIFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTE 162

Query: 192 MLAGHFAHVVEAEKVAAEPDALSLIAQAAEGSARDGLSILDQAIA 236
            L  +   + E E +  E   +  I   +EG  R  +++L  A A
Sbjct: 163 DLVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTAAA 207