Pairwise Alignments

Query, 398 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

Subject, 405 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (360), Expect = 1e-38
 Identities = 102/349 (29%), Positives = 175/349 (50%), Gaps = 17/349 (4%)

Query: 14  LFALSVGAFAIGTTEFASMSLLPFFARDLHIDLPTAGHAISAYALGVVVGAPLIAAFAAR 73
           + A+S+ AF +  +EF  +SLL   A DLH+    AG  I+      ++ +  IA+ AA+
Sbjct: 16  VLAMSLAAFVLVASEFMPVSLLTPVAADLHVSEGQAGQGIAVSGAFALITSLFIASIAAQ 75

Query: 74  LPRRTLLIALMAMFAVGNGLSALSPSYHWMLLFRFLSGLPHGAYFGVAALVAASLVPIEK 133
           + R+ LL+ L  +  V   + A +P+Y   +L R L G+  G ++ ++A  A  LVP ++
Sbjct: 76  VDRKWLLLGLTLLMIVSGTVVAFAPNYPVFMLGRALIGVAIGGFWSLSAATAMRLVPDDQ 135

Query: 134 RTLAIAKVMSGLTIATVLGVPVANWMGQILGWRSGFFVVCALAVLTMSLVALYAPRDAGD 193
              A+A V  G  +ATV+  P+ +++G I+GWR  FF +  +A + +  + L  P     
Sbjct: 136 VPQALAIVNGGNALATVVAAPLGSFLGAIIGWRGAFFCIVPVAAIALVWLLLRLPSMPSQ 195

Query: 194 PKASPMRELSALGKSQVWLTLLTGAIGFGGLFAVYTYVASTMIEVTHVSETLVPLILIVF 253
            K         + ++ V L +L  +  F G F ++TY+   +  VT VS +++  +L+V 
Sbjct: 196 AKRGGTNVFKLMTRAPVALGMLAVSTFFMGQFMLFTYLRPFLETVTQVSVSMLSFMLLVI 255

Query: 254 GLGMTIGNLVVAWLADRALNRTVIGI-LVWSAVALALFPFMAGNIWSLSLIVFLIGIGG- 311
           G+   +G  ++       L RT+I I L+ +A+A+AL  F      S+++  FL+G+ G 
Sbjct: 256 GVAGLLGTFLIGVCLKNNLYRTLIVIPLLMAAIAIALVGFGG----SITIATFLLGLWGL 311

Query: 312 -------GMGTPLQARLMDVAGDAQTLAAALHHSAFNIANALGPWLGGL 353
                  G  T L   L + A     L  A+      +A A G  +GGL
Sbjct: 312 VATAAPVGWWTWLSRTLPEDAEAGGGLMVAI----VQLAIAAGATVGGL 356