Pairwise Alignments

Query, 398 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

Subject, 386 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  266 bits (681), Expect = 6e-76
 Identities = 153/385 (39%), Positives = 230/385 (59%), Gaps = 4/385 (1%)

Query: 12  LVLFALSVGAFAIGTTEFASMSLLPFFARDLHIDLPTAGHAISAYALGVVVGAPLIAAFA 71
           L L AL+V AF IGTTEF  M LLP  ARDL + +P AG  I+ YALGVV GAP++A   
Sbjct: 3   LALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPQAGLLITGYALGVVFGAPILAIGT 62

Query: 72  ARLPRRTLLIALMAMFAVGNGLSALSPSYHWMLLFRFLSGLPHGAYFGVAALVAASLVPI 131
           A +PR+  L+ +  MF +GN L AL+P+Y  ++  R ++ L HGA+FG+ ++VAA LV  
Sbjct: 63  ANMPRKATLLGMTLMFILGNVLCALAPNYTTLMAARVITALCHGAFFGIGSVVAAGLVAP 122

Query: 132 EKRTLAIAKVMSGLTIATVLGVPVANWMGQILGWRSGFFVVCALAVLTMSLVALYAPRDA 191
            KR  AIA + +GLT+A VLGVP+   +GQ  GWRS F+ V  + V+      ++ P++ 
Sbjct: 123 NKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSIIGVIAAIAQWVWLPKEI 182

Query: 192 GDPKASPMRELSALGKSQVWLTLLTGAIGFGGLFAVYTYVASTMIEVTHVSETLVPLILI 251
              KA+   E   LGK+ V L L    +    LF+V+TY+A  + ++T VS   + ++L+
Sbjct: 183 PMDKANLASEFKVLGKANVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGITVMLL 242

Query: 252 VFGLGMTIGNLVVAWLADRALNRTVIGILVWSAVALALFPFMAGNIWSLSLIVFLIGIGG 311
           +FG+G+T G+ +   LADR L  +++G+ +   + LA F   + ++   ++ + L GI  
Sbjct: 243 LFGVGLTAGSFLGGRLADRRLLPSLVGMALAVVLVLAAFSQTSRSVIPAAITLVLWGIFA 302

Query: 312 GMGTP-LQARLMDVAGDAQTLAAALHHSAFNIANALGPWLGGLSIAAGYGLVSTGWIGCA 370
               P LQ  ++D A +A  L + L+ SAFN+ NA G W+GGL +A+G  L    W G A
Sbjct: 303 FALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWMGGLVVASGADLADLPWTGAA 362

Query: 371 LSLGGLAIYLVAIATARRSAQPALV 395
             +GGL + L A+   +R  + A V
Sbjct: 363 --VGGLTV-LTALFFIQRQRRLAAV 384