Pairwise Alignments

Query, 398 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

Subject, 388 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  258 bits (660), Expect = 2e-73
 Identities = 152/388 (39%), Positives = 222/388 (57%), Gaps = 8/388 (2%)

Query: 12  LVLFALSVGAFAIGTTEFASMSLLPFFARDLHIDLPTAGHAISAYALGVVVGAPLIAAFA 71
           L L  L++ AFAIGTTEF  M LLP  A DL + +P AG  ++ YALGV +GAP +A   
Sbjct: 3   LSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALAT 62

Query: 72  ARLPRRTLLIALMAMFAVGNGLSALSPSYHWMLLFRFLSGLPHGAYFGVAALVAASLVPI 131
           ARLPR+  L+ALM +F VGN L A++  Y+ ++  R ++ L HGA+FG+ ++VAA LV  
Sbjct: 63  ARLPRKAALVALMGIFIVGNLLCAIASDYNVLMFARVVTALCHGAFFGIGSVVAAGLVAP 122

Query: 132 EKRTLAIAKVMSGLTIATVLGVPVANWMGQILGWRSGFFVVCALAVLTMSLVALYAPRDA 191
            KR  A+A + +GLT+A VLGVP+   +GQ  GWRS F+ V  + V+ +  +  + P   
Sbjct: 123 NKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPAKR 182

Query: 192 GDPKASPMRELSALGKSQVWLTLLTGAIGFGGLFAVYTYVASTMIEVTHVSETLVPLILI 251
            + K     EL AL  + +WL+L   A+    +F ++TYVA  + EVT VS   V   L+
Sbjct: 183 DEEKLDMRSELVALKGAGLWLSLSMTALFSASVFTLFTYVAPLLGEVTGVSPRGVTWTLV 242

Query: 252 VFGLGMTIGNLVVAWLADRALNRTVIGILVWSAVALALFPFMAGNIWSLSLIVFLIGIGG 311
           + GLG+T+GN++   LAD++L  T++G+ +  AV   +  + +  +    + +FL     
Sbjct: 243 LIGLGLTLGNIIGGKLADKSLANTLMGVFLTMAVVSTVLSWTSVALIPSEITLFLWATAC 302

Query: 312 GMGTP-LQARLMDVAGDAQTLAAALHHSAFNIANALGPWLGGLSIAAGYGLVSTGWIGCA 370
               P LQ  ++    DA  L + L+  AFNI NALG W+GG  I  G GL S       
Sbjct: 303 FAAVPALQVNVVTFGKDAPNLVSTLNIGAFNIGNALGAWVGGSVIDHGLGLTSV-----P 357

Query: 371 LSLGGLAI--YLVAIATARRSAQPALVP 396
           L+ G LA+   LV + T R+     L P
Sbjct: 358 LAAGALAVLALLVTLITFRQGGNADLAP 385