Pairwise Alignments

Query, 398 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

Subject, 388 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  272 bits (696), Expect = 1e-77
 Identities = 155/386 (40%), Positives = 224/386 (58%), Gaps = 4/386 (1%)

Query: 12  LVLFALSVGAFAIGTTEFASMSLLPFFARDLHIDLPTAGHAISAYALGVVVGAPLIAAFA 71
           L L  L++ AFAIGTTEF  M LLP  A DL + +P AG  ++ YALGV +GAP +A   
Sbjct: 3   LSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALAT 62

Query: 72  ARLPRRTLLIALMAMFAVGNGLSALSPSYHWMLLFRFLSGLPHGAYFGVAALVAASLVPI 131
           ARLPR+  L+ALM +F VGN L AL+  Y  ++  R ++ L HGA+FG+ ++VAA LVP 
Sbjct: 63  ARLPRKAALVALMGIFIVGNLLCALASDYQVLMFARVVTALCHGAFFGIGSVVAAGLVPA 122

Query: 132 EKRTLAIAKVMSGLTIATVLGVPVANWMGQILGWRSGFFVVCALAVLTMSLVALYAPRDA 191
            KR  A+A + +GLT+A VLGVP+   +GQ  GWRS F+ V  + V+ +  +  + P   
Sbjct: 123 NKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPAKR 182

Query: 192 GDPKASPMRELSALGKSQVWLTLLTGAIGFGGLFAVYTYVASTMIEVTHVSETLVPLILI 251
            + K     ELSAL  + +WL+L   A+    +F ++TYVA  + EVT VS   V   L+
Sbjct: 183 DEEKLDMRAELSALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGEVTGVSPRGVTWTLM 242

Query: 252 VFGLGMTIGNLVVAWLADRALNRTVIGILVWSAVALALFPFMAGNIWSLSLIVFLIGIGG 311
           + GLG+T+GN++   LAD+ +  T+IG+ +  AV   +  + +  +    + +FL     
Sbjct: 243 LIGLGLTVGNIIGGKLADKGMAATLIGVFISMAVVSTVLTWTSVAVIPTEITLFLWATAC 302

Query: 312 GMGTP-LQARLMDVAGDAQTLAAALHHSAFNIANALGPWLGGLSIAAGYGLVSTGWIGCA 370
               P LQ  ++     A  L + L+  AFN+ NALG W+GG  IA G+GL S      A
Sbjct: 303 FAAVPALQVNVVTFGKAAPNLVSTLNIGAFNVGNALGAWVGGSVIAHGFGLTSVPLAAAA 362

Query: 371 LSLGGLAIYLVAIATARRSAQPALVP 396
           L++  L   LV + T R+S  P L P
Sbjct: 363 LAILAL---LVTLITFRQSGNPELAP 385