Pairwise Alignments

Query, 304 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 1e-46
 Identities = 110/297 (37%), Positives = 156/297 (52%), Gaps = 11/297 (3%)

Query: 4   DHELFVSIVDEGGLAAAGRRLHISPAMMSKRLARLEDRLGARLIHRTTRRLALTPAGERL 63
           D  LF SIV   GLAAAGR L +SPA ++ RL  LEDR G +L++R+TR L+LT +G   
Sbjct: 6   DMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLY 65

Query: 64  HGDLRAILASLDEAERRVSGVSAIASGPLRITAPTSFGRMHLAPYLQPFLDDHPRVDLRL 123
           H     IL S+ E E  +   S    G L+++AP   G+ H+AP L  F + +P V   L
Sbjct: 66  HQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYL 125

Query: 124 DLSDDYVDLIESRADLAIRIAADPGAGLTARRLAPNRRILCAAPAYLDRFGTPRRIADLK 183
            L+D+  +L ES  D+ IR      + L +R+LA +RR+LCA+PAYL R G P+   DL 
Sbjct: 126 YLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLA 185

Query: 184 QHRLLAA----DGQLPWRLIGPKGPVAIDGHSHIRTNSSEVVRELALSGSGIALRSLWDI 239
           QH  LA     +    W     +    I        +  EV+R+ AL+G GIAL+S+ D+
Sbjct: 186 QHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALKSILDV 245

Query: 240 SDALAQGDVRQILPDH-------EGSSDVALYAVQLPQANPPLAITAFVDFLAAQYA 289
            D L Q  +  +L  +         +S   L  + L +   P  +  F+DFL  Q A
Sbjct: 246 QDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQCA 302