Pairwise Alignments

Query, 888 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Sphingobium sp. HT1-2

Subject, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  852 bits (2200), Expect = 0.0
 Identities = 457/894 (51%), Positives = 587/894 (65%), Gaps = 52/894 (5%)

Query: 3   STNDIRRSFLDYFGANGHTIVPSAPLVPHNDPTLMFVNAGMVPFKNVFTGLETRPYKTAT 62
           ST+++RR+FL +F + GH IV S+ LVP NDPTL+F NAGM  FK+ F GLE R Y  AT
Sbjct: 4   STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63

Query: 63  SSQKSVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIHHAWTLLTKEWGLPA 122
           ++Q+ VRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKE AI +AW  LT    LP 
Sbjct: 64  TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123

Query: 123 EKLTTTVYHTDDEAFDLWKKIAGLPDHKIIRIPTK--------DNFWVMGDSGPCGPCSE 174
           E+L  TVY TDDEAFD+W K  G+P  +IIRI  K        DNFW MGD+GPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183

Query: 175 IFYDHGDHIWGGPPGSPEEDGDRFVEIWNLVFMQYEQEANEIVSELPKPSIDTGMGLERI 234
           IFYDHGDHIWGGPPGSPEEDGDRF+EIWN VFMQ+ + A+  +  LPKPS+DTGMG+ERI
Sbjct: 184 IFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243

Query: 235 AAVMQGVHNNYDIDTFKALIAESGALTRTATDGEFQASHRVIADHLRSTSFLIADGVLPA 294
           +A+MQGVH+NY+ID F+ LI    A            S RV+ADH+RS +FLI DGV+P+
Sbjct: 244 SAIMQGVHSNYEIDVFQTLI--KAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMPS 301

Query: 295 NEGRGYVLRRIMRRAMRHAHIIGAKDPLMYRLVSSLVSEMGGAYPELVRAQPLIEETLLR 354
           NEGRGYVLRRI+RRA+RH + +GA+    ++LV  L   MG A  EL + Q L+E+ L  
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRI 361

Query: 355 EETRFRKTLENGLKLLDEATADLAEGATLPGETAFKLYDTYGFPYDLTEDALRTQGLSVD 414
           EE  F +TL+ G+ +L++A  D   G  L GET FKLYDTYGFP DLT D  R +G S+D
Sbjct: 362 EEENFGRTLDRGMSILNDA-LDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420

Query: 415 RAGFDAAMAEQKAAARAAWKGSGEKASDEIWYDIAETLGSTEFIGYTSTKGEGEVLAIIK 474
            AGF+ AM EQ+  AR A    G+  +D  +  + ++  +TEF GYT+++G+  V  +  
Sbjct: 421 EAGFEQAMEEQRQRAREA----GQFGTD--YNSLIKSATNTEFCGYTASRGQSVVREMFV 474

Query: 475 DGARVDAASAGDKVTIITNQTPFYGESGGQNGDAGTITTLGGLVAEVADTSKPLGRLHAH 534
           +GA V   SAGDK  I+ + TPFY ESGGQ GD G + T  G +  V DT K LG   AH
Sbjct: 475 EGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG-IFHVEDTQK-LGNAIAH 532

Query: 535 QAVISAGSVKVGDTVNLTVDVERRDRIRANHSATHLLHAALRKELGGHVTQKGSMVAADR 594
             VI+ G +  GD V+  VD +RR  I  NHSATHLLHAALRK LG HV QKGS+V A+ 
Sbjct: 533 HGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAET 592

Query: 595 LRFDFSHPEALTQAQIARVEADVNAQIRHNDEVMTRLMTPDDAIAAGAMALFGEKYGDEV 654
           LRFDFSH EA+T A+I  VE  VN ++R N  + T +M  D+A A GAMALFGEKY D+V
Sbjct: 593 LRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQV 652

Query: 655 RVLSMGAKGLGGDDHSYSVELCGGTHVRALGDIALFKIVSESAVSSGVRRIEALTGEAAR 714
           RVLSMG          +S ELCGG H    GDI LFKI+SE  +++G+RRIEA+TGE A 
Sbjct: 653 RVLSMG---------DFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGAL 703

Query: 715 LWLVERDEKLRQTAAALKTTPEEVPARIAALVEQSRKLERELAEAKKALALGGGGSAKPA 774
            +              L     +  A+++ +  +++ LE+E+ + K  LA     + + A
Sbjct: 704 DY--------------LDAQQAQHDAKVSEMAAKAKLLEKEIQQLKDKLA-----AKESA 744

Query: 775 G----PEKVGSVDFLGQVIDGLDPKELRGIVDGNKKTLGSGVSAVLAVVDGRATIAVGVT 830
           G     +++  V+ L   ++G D K LRG+VD  K  L SG+  +  V +G+  +  GVT
Sbjct: 745 GLINQVKQIAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVT 804

Query: 831 DDLTGSFSAVDLVRAGVAALGGKGGGGRADMAQGGGPDGDKAQAAIDAVKAALA 884
           +DLT    A +LV      +GGK GGGR DMAQ GG D     +A+++V A +A
Sbjct: 805 NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVDAWIA 857