Pairwise Alignments

Query, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

Subject, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

 Score =  115 bits (288), Expect = 1e-30
 Identities = 72/183 (39%), Positives = 100/183 (54%), Gaps = 16/183 (8%)

Query: 270 AAPAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPIGRLDMNTEGLLLLTTD 329
           A PA  RL L +KP   LT   D  GR T+ D +  D+P + P GRLD ++EGLLLLT D
Sbjct: 25  APPAEPRLLLLNKPFDVLTQFNDADGRATLKDFV--DVPGVYPAGRLDRDSEGLLLLTND 82

Query: 330 GEFKREMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIEA-NLE------ 382
           G+ +  +  P   +P+TY  +  GEVS +QL+ L DG+E++     P EA  LE      
Sbjct: 83  GQLQARIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLEEPELWP 142

Query: 383 -------RRTGRNQWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGELAGGAV 435
                  R++    W+E+ + EG+NR+VRR+     L   RL+R   GP+ LG L  G  
Sbjct: 143 RNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGGLQPGEW 202

Query: 436 EEV 438
            EV
Sbjct: 203 REV 205