Pairwise Alignments

Query, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

Subject, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 9/205 (4%)

Query: 216 QRIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATLLTSLHGVTVDGDPVAAPAPA 275
           +R+ K ++  G  SRRE +++IE+GR+  +G+  +   + +T    V +DG P+ +    
Sbjct: 19  KRLNKFISETGYCSRREADKLIEQGRVTLNGLQPEV-GSKVTEQDEVCIDGKPLRSKERP 77

Query: 276 RLFLFHKPTGFL-TTERDPAGRPTIYDILPDDLPRLMPIGRLDMNTEGLLLLTTDGEFKR 334
                +KPTG   TTERD  G   I D +     R+ PIGRLD  ++GL+ LT DG+   
Sbjct: 78  IYIALNKPTGITCTTERDVPGN--IVDFIGHH-KRIFPIGRLDKPSDGLIFLTNDGDIVN 134

Query: 335 EMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIEANLERRTGRNQWIEMT 394
           ++        + Y  R    ++ + +  +  G+ I      P +   E +        + 
Sbjct: 135 KILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYS----FRIV 190

Query: 395 LTEGKNREVRRVLEHFELKVNRLIR 419
           LT+G NR++RR+ E    +V +L R
Sbjct: 191 LTQGLNRQIRRMCEALGYEVFKLRR 215