Pairwise Alignments

Query, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

Subject, 236 a.a., pseudouridine synthase, Rsu (RefSeq) from Shewanella sp. ANA-3

 Score = 96.3 bits (238), Expect = 9e-25
 Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 17/242 (7%)

Query: 217 RIAKLLARAGIASRREIERMIEEGRIARDG--------VTIDTPATLLTSLHGVTVDGDP 268
           R+AK LA+ GI+SRRE  R+IE GRI+ +G        V  D     L SL    +D  P
Sbjct: 2   RLAKYLAQCGISSRREACRLIEAGRISLNGKIAKHTDAVHFDADGQCLDSL---CLDEKP 58

Query: 269 VAAPAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPIGRLDMNTEGLLLLTT 328
           ++       ++F+K  G      D A + ++  +LP   PRL P+GRLD ++ GLLLLT 
Sbjct: 59  ISGAEALSYWIFNKAVGTDCRLLD-ADKSSLLHLLPTT-PRLYPVGRLDKDSRGLLLLTN 116

Query: 329 DGEFKREMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIEANLERRTGRN 388
           DGE   ++  P+    +TY  +     +   +  +  G++   ++  P +     R   +
Sbjct: 117 DGELTHKLMHPSFAHSKTYHVQLDRPFNDAFIAQMASGVQYKEVRTLPCQVT---RLSAD 173

Query: 389 QWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGELAGGAVEEVRQHDLVAFRS 448
           ++ E+ LT+G NR++RR+      KV  L R +     L  LA G +  +   ++   ++
Sbjct: 174 RF-EIVLTQGLNRQIRRMSNALGYKVIDLQRVALMTLTLASLAEGEMRPLSPEEITTLKA 232

Query: 449 SL 450
           ++
Sbjct: 233 AV 234