Pairwise Alignments

Query, 585 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (349), Expect = 5e-37
 Identities = 83/263 (31%), Positives = 150/263 (57%), Gaps = 6/263 (2%)

Query: 326 ARTSELEAMVTDRTRELRREMEERAASETRADTLREGLRQANRLASLGQITAGIAHETAQ 385
           ++  + E  + +  R+L++ +EER A+   A   ++ L +A+++A+LG++++ I HE  Q
Sbjct: 424 SKRKKAEIALQNANRDLQQRVEERTAALKSA---QQELIEASKMAALGRMSSAITHELNQ 480

Query: 386 PVAAIRSYAANGRLLIARGDSEAAAENMAAIERLTDRIGKVTAELRGFSRKATGAIDAIP 445
           P+  +R+  ++  LL+ RG+++    N   +  L DR+  +T++L+ F+     A+ AI 
Sbjct: 481 PLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAIS 540

Query: 446 LAGPIEGSVLILKSRLARVDLHLPDLPDDLRVMADTIRLEQVLVNLLQNALEALEGVTAP 505
           L   ++  + I ++RL  VD+ +    D   VM +  RL QVL NL+ NAL+A+     P
Sbjct: 541 LPDALQEILRIHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEP 600

Query: 506 TIRLSVALDAETVLLSVIDNGPGIDPSVQGQLFTPFVTSRP--SGLGLGLVIASDIMADM 563
            + +S   + + V++ V DNG GI P +   +F PF TS+    GLGLGL I ++ + DM
Sbjct: 601 KLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDM 660

Query: 564 GGSLRLLPS-EVGAHFQLSLKRA 585
            GS+    + + G  F++ L+ A
Sbjct: 661 QGSIVATNNPDAGMSFEIRLRAA 683



 Score = 38.9 bits (89), Expect = 7e-07
 Identities = 68/324 (20%), Positives = 116/324 (35%), Gaps = 71/324 (21%)

Query: 8   NRILWIALFLGVAGGLLWLSGEVAERNAIARLSAETRGAAILRQAYLKSEIERFRLLPIA 67
           N+  WI L + +   + W S  V+E   + +         +   + ++  + RF  LP  
Sbjct: 4   NKASWIVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYL 63

Query: 68  LSDDSDLVAGLTGSQAALRALDRKLQALARTTGAAQIYVLDASGRTVASS----NWGSER 123
           ++++++ +    G       L ++L  L +       Y+L  SG  + +S    NW    
Sbjct: 64  MTNEANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENW---- 119

Query: 124 SFVGQDYSFRNYFKLAAAHGSGAQFALGTISERPGMYLSRRSRGG--------------- 168
                        KL+     G       + +R G+ +  +S G                
Sbjct: 120 -------------KLS----DGKAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVE 162

Query: 169 --GYVVVKLEFDGIEQQWARLGE-ITFITSREGIILITSR---PDWRFTTIHPLSAQAKQ 222
             G V V+++ + +  QW    E I F  S+    L +S     DW  T  HP    A Q
Sbjct: 163 IVGAVAVQVDLNVLADQWFASDELILFQNSQRHYFLSSSSVYSADWIAT--HPEVVAAAQ 220

Query: 223 RFRAELQSGRGSLLPVPLRGMGDADGRQIVSPADEPRRRLLWQSVAAGEPGWQLNMLTPL 282
           +                 R + D     +      P    L QSV   +  W L  LTPL
Sbjct: 221 K-----------------RSLFDGTRLTLWQVEQAP---YLAQSVTLDDLNWTLTYLTPL 260

Query: 283 HGVE---SFVRTVRLATLLLLLLL 303
             +    +++ T  +  +LLLLLL
Sbjct: 261 KNLNATVNWISTSAMVGVLLLLLL 284