Pairwise Alignments

Query, 585 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  248 bits (632), Expect = 7e-70
 Identities = 186/604 (30%), Positives = 302/604 (50%), Gaps = 34/604 (5%)

Query: 1   MDSARFPNRILWIALFLGVAGGLLWLSGEVAERNAIARLSAETRGAAILRQAYLKSEIER 60
           M S R  + +LW+   +     L+ +S  +  R     L  E +       +++ + +++
Sbjct: 1   MPSIRRLSLMLWVMFIV-----LVSMSTHLYWRFQYQALLNEHQSQLDRFSSHIVATLDK 55

Query: 61  FRLLPIALSDDSDLVAGLTGSQ--AALRALDRKLQALARTTGAAQIYVLDASGRTVASSN 118
           +  +P  +S D +LV  L  +Q  A +   +R L+ +     AA  Y++D  G T+ASSN
Sbjct: 56  YAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSN 115

Query: 119 WGSERSFVGQDYSFRNYFKLAAAHGSGAQFALGTISERPGMYLSR----RSRGGGYVVVK 174
           W  +RSF+G+++++R YF L+ A      FALG+ S + G Y +      +   G +VVK
Sbjct: 116 WNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVK 175

Query: 175 LEFDGIEQQWARLGEITFITSREGIILITSRPDWRFTTIHPLSAQAKQRFRAELQSGRGS 234
           ++   IEQ W         T    ++ ++S+P W F ++  LS       R   QS +  
Sbjct: 176 MDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIR---QSQQYL 232

Query: 235 LLPVPLRG-MGDADGRQIVSPADEPRRRLLWQSVAAG-----EPGWQLNMLTPLHGV--E 286
             P+P  G  GD    Q  S   +P +  L            E    + +L+P   +   
Sbjct: 233 DSPIPSLGWQGDLQAEQ--SEWRKPEKHWLQDDYIVSSRPLPELALTIRVLSPKIELFWS 290

Query: 287 SFVRTVRLATLLLLLLLAGGIWILRERGHRRAERAAMAAARTSELEAMVTDRTRELRREM 346
           +F   + L  L  ++ L   +W  R+   R+ E+      +  E E M  +RT +L  E+
Sbjct: 291 AFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVM--ERTAKLHAEI 348

Query: 347 EERAASETRADTLREGLRQANRLASLGQITAGIAHETAQPVAAIRSYAANGRLLIARGDS 406
            ER  +E      ++ L QA +LA LGQ++A I+HE   P+AAIRS+A NGR  +A    
Sbjct: 349 AERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKP 408

Query: 407 EAAAENMAAIERLTDRIGKVTAELRGFSRKATG----AIDAIPLAGPIEGSVLILKSRLA 462
           E A EN++ I  LT+R+ K++ +L+ F+RK+T      +   PL   +    L+     A
Sbjct: 409 ERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLI--LSAKELMTGQFKA 466

Query: 463 RVD-LHLPDLPDDLRVMADTIRLEQVLVNLLQNALEALEGVTAPTIRLSVALDAETVLLS 521
           ++  L L DL   + V  + I+LEQVL+NLL NAL+ALEG     +++ +    + + L 
Sbjct: 467 QMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQIALF 526

Query: 522 VIDNGPGIDPSVQGQLFTPFVTSRPSGLGLGLVIASDIMADMGGSLRLLPSEV-GAHFQL 580
           V DNGPG+       LF PF T++ +GLGLGL I+  I+  M G+L +  S + GA F +
Sbjct: 527 VDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSVATSPLGGARFTI 586

Query: 581 SLKR 584
           +L R
Sbjct: 587 TLPR 590