Pairwise Alignments

Query, 456 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 99/409 (24%), Positives = 157/409 (38%), Gaps = 12/409 (2%)

Query: 12  RALVTLAIPMIAGNVAWSGIAATDLLLVGRLGAEAVAAGALAINLFNALLIFGLGLVTAA 71
           R L+ +A+P+   N+ +S     D+L++G+LG   +AA  +A        I  +G+ T  
Sbjct: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76

Query: 72  APLIASERGRR-RHSVRDVRRTVHQTLRAAAFFVLPAWLILWHCEAILRAMGQEPDLARE 130
           A L A   G   R  VR+            AFF +   L L+  + I+        +   
Sbjct: 77  ALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTV--LLFLFFPQQIMSLTTDSEQVNAL 134

Query: 131 AGHLMRGMQWALLPFLCFTTLRNFISALERPLWGLIIMLLAIPFNVLVGWALIFGHLGLP 190
               +    + +    C +++   + A+ +P        + I  NV++ W LIFG  G P
Sbjct: 135 GSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFP 194

Query: 191 ALGLLGAGIASTLSSTFLFLGLLTVILVDRRFRRYRLMGRFWTRDRDRQRAVWTLGLPIA 250
           A+G+ GA IA+ LS       L + +   +    +         D  +      L LP  
Sbjct: 195 AMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPTT 254

Query: 251 ITLGLEVTVFNASAFLMGLIDRESLAAHAVAIQIASLVFMVPMGIGQAATVRVGVAYGRA 310
               +          +MG    + LAA +V   + S+   + +G+  AA V VG   G  
Sbjct: 255 FNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAK 314

Query: 311 DPAAI--GRAGWLALIVGTGFAMAAALMLVLIPRPLVSIFLDVHDPANLATANLAVSFLA 368
           +  A+     G  A  V  G  +A  L LV IP       L         T  L+  F+ 
Sbjct: 315 NYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIP------VLGAFTALTPETRELSEKFML 368

Query: 369 VAAL-FQLVDAAQAVGAGVLRGIQDTKVPMIFALFGYWIIGIGVGALLA 416
           +  L   L         GVLR   D K  +   +   W IGI + A  A
Sbjct: 369 ILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAA 417