Pairwise Alignments

Query, 401 a.a., ABC-type antimicrobial peptide transport system, permease component from Sphingobium sp. HT1-2

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 75/430 (17%)

Query: 11  RAINRHKMRSFLT---TLGIIIGVAAVVTMVTLGNGATAAVREQISSLGANVLQLRPGQG 67
           RA  R+KM SF++   T+GI +GVA ++  ++  NG           L   VL + P   
Sbjct: 15  RAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFE-------RELQTRVLSVIPHGE 67

Query: 68  FGRGGGGPRPPNFKEADLTAIENQLTGVRAVAPVVQSSGTAIYEGNNWSTTVYGT----- 122
           F     G R P  +  DL A   +   + A AP V+ +  A       +  V G      
Sbjct: 68  F----EGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQRE 123

Query: 123 -----TSAYSQVQSWNVSEGRLFMPDEEE-------AGKSVCIIGNTVRTNLFQGNDPIG 170
                 S +   Q+W     + F P +++       A K    +G+ +   +   N    
Sbjct: 124 QAVSRLSQFITAQAW-----QDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSG-D 177

Query: 171 KRMRIKGVSCQVVGVLATRGQGGFGDQDDVVVMPIKFVQRRFTGDRDISQIMVAVDDAYD 230
           K    K V  +V G+LA  GQ        + ++P++  Q        ++ I V V D   
Sbjct: 178 KVQAPKRVRVKVSGLLALNGQ----IDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQ 233

Query: 231 SATVQDSLEQLMRERRKIKAGAEDNFNVF--DTKQISDTLTGTTTILTQIVAAVAAISLL 288
           +        Q++R+      G + N  V+    +Q    L     ++  I+  V  + + 
Sbjct: 234 AT-------QIVRD-----VGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIG 281

Query: 289 VGGIGIMNIMLVSVTERTREIGIRLAIGAVAREVLMQFLVEAIVLSCMGGLIGLVIALIA 348
           V    I++ ++++V +R  EI I   +GA    +   F+ + +    +G ++G V+ ++ 
Sbjct: 282 VASFNIVSTLMMAVKDRAGEIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVV 341

Query: 349 SVGIAPLMK-----VPFTF-DPQVNLIAFLFS----AAIGVVFG----------YFPARR 388
           +  + PL+K     +   F    +  + FL S    A + +V G          ++PARR
Sbjct: 342 AFNLTPLIKGLEHLIGHQFLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARR 401

Query: 389 AASLNPIDAL 398
           A+ LNP   L
Sbjct: 402 ASRLNPAQVL 411