Pairwise Alignments

Query, 406 a.a., FIG022606: AAA ATPase from Sphingobium sp. HT1-2

Subject, 281 a.a., MSHA biogenesis protein MshM from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 2e-33
 Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 4/265 (1%)

Query: 1   MYDQFYGLQGRPFQLTPDPHFYFESTTHRKALSYLGYGLAQGEGFIVITGDIGAGKTTLV 60
           MY   +GL+  PF LTPD   +     H +A+  L   +  GEG   +TG++G GKT + 
Sbjct: 1   MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC 60

Query: 61  GHLMSTIDPARLTATKIVSTQVEGDDMLRLAAQSFGLATDGVAKAQILRQIEAYLQGQAR 120
             L++ +    +    + +  + G+++ +  A    L  D  +  +++ QI+  L    +
Sbjct: 61  RMLLTHLGD-EVALIYLPNPMLSGEELRQAVAAELQL--DVASPVRVVEQIQTRLIELHQ 117

Query: 121 AGRRSLLIVDEAQNLPVSAIEELRMLSNFQLGGQSLLQIFLLGQPEFRDLVRSPELEQLR 180
            G+R + +VDEAQ L   A+E LR+  N +     LLQI L+GQPE    +    L Q R
Sbjct: 118 QGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFR 177

Query: 181 QRVIATHHLDPMLPQEVEPYISHRLTLVGWTGNPYFTDDALDAIYAATGGVPRRINALVS 240
           QR+    +L P+   E E YI  RL        P F      A++ A+ G+PR IN +  
Sbjct: 178 QRITFNANLRPLTQAETEVYIESRLQ-KAQAPYPLFNATLKKAVWRASQGIPRLINQICH 236

Query: 241 RVLLLGALEQLTEIDGQAVQAVIED 265
           + LLL   EQ   ++   + A I D
Sbjct: 237 KALLLAWHEQSPLVNQHHLFAAIHD 261