Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 6e-49
 Identities = 98/295 (33%), Positives = 157/295 (53%), Gaps = 7/295 (2%)

Query: 3   LPDFEAWAMFAAVVEHRSFTDAAKALSVSKATVSKAVTRLEQHLDTSLFSRTSRRLALTE 62
           LPD    A F  VV   SFT AA  L V+ + +SK +TRLEQ L   LF RT+R+L +T+
Sbjct: 10  LPDL---ATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQ 66

Query: 63  SGRRLADHAQRILAEGQAAEEAARDETAELSGTVRLGAPMNFGLLRIAPLIAQFTKENPL 122
           +G+++ D +  ++   Q A E +  E AE +G + + AP  F    + P +  F  + P 
Sbjct: 67  AGQKVYDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPH 126

Query: 123 VDVDLHLSDAKIDIVELGLDATIRIADMPDSSLRARRLADVHMHVVASPAYLAERGRPTH 182
           + + L  +D  ID+ +  +D   R+ D PD +L  R L   ++ + ASP YLA+RG P H
Sbjct: 127 IQLKLRAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIH 186

Query: 183 PSDLGSHDCLCYSNVTAPDVWRFTGPGQQNVTVQVRPRITVNSGEAMMPALRLGVGIARL 242
           P+DL  HDCL  +      +W F   G++  TV V  R  VN  +  +  ++  +GI   
Sbjct: 187 PTDLAEHDCLYLAETDKDHIWTF-AKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIF 245

Query: 243 PDFIVGDAIRSGELEEILLDWRPPP---FGLHLVTPPSRLRPARVEALLDFLTRH 294
            DF+V DA+ +G++ ++L +W         + +    ++  PAR+   +DF+  H
Sbjct: 246 HDFVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEH 300