Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  190 bits (482), Expect = 4e-53
 Identities = 107/298 (35%), Positives = 176/298 (59%), Gaps = 6/298 (2%)

Query: 1   MRLPDFEAWAMFAAVVEHRSFTDAAKALSVSKATVSKAVTRLEQHLDTSLFSRTSRRLAL 60
           M L   +    F AVV+  SFT AA  L +S   VSK V++LE+HL   L +RT+RR+ +
Sbjct: 1   MALDRIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNV 60

Query: 61  TESGRRLADHAQRILAEGQAAEEAARDETAELSGTVRLGAPMNFGLLRIAPLIAQFTKEN 120
           TE+GR   +  Q++L + +  + A  + +   SG +++ APM+FG+  +   + QF +++
Sbjct: 61  TEAGRAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQH 120

Query: 121 PLVDVDLHLSDAKIDIVELGLDATIRIADMPDSSLRARRLADVHMHVVASPAYLAERGRP 180
           P V +D+ L+D K+D++E G+D  +RI  +  SSL A++L  + + V ASP YLAERG P
Sbjct: 121 PDVRLDITLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEP 180

Query: 181 THPSDLGSHDCL--CYSNVTAPDVWRFTGPGQQNVTVQVRPRITVNSGEAMMPALRLGVG 238
             P+DL  H+ L   YS++ A     F   G+    +++   +  N+G+ ++ A   G G
Sbjct: 181 KTPADLIHHNYLHFSYSDLGA----AFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRG 236

Query: 239 IARLPDFIVGDAIRSGELEEILLDWRPPPFGLHLVTPPSRLRPARVEALLDFLTRHHG 296
           I   P F+V  A+RSG+L+ IL D+ P PFGL+ V    +   ++V   +D L++++G
Sbjct: 237 IVVQPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQYYG 294