Pairwise Alignments

Query, 203 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

Subject, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 6e-41
 Identities = 94/247 (38%), Positives = 131/247 (53%), Gaps = 53/247 (21%)

Query: 3   QAIHPHSRDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEG 62
           Q +H  S+  +  A+ ++ AVIEF PDGTI+ AN  FL TMGY+L +I G+HHR+FC + 
Sbjct: 130 QYLHAESQRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFD- 188

Query: 63  QALSTAYAALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDT 122
                 +   W  LA G   +G + R + +G  +W+QA+Y+PV +   +V +I+K A+D 
Sbjct: 189 -EFYQQHPTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDI 247

Query: 123 TPSKILR---------------AELKSTVDG----------------------------- 138
           T +++LR                E      G                             
Sbjct: 248 T-AEVLREQQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQL 306

Query: 139 ------LVDIVETISGIANQTNLLALNATIEAARAGEAGRGFAVVAAEVKKLAGDTRAAT 192
                 + +IV+TISGIA+QTNLLALNA IEAARAGE GRGFAVVA EV++LA  T  AT
Sbjct: 307 VVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKAT 366

Query: 193 DRARAMV 199
           +    +V
Sbjct: 367 EEINQVV 373



 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 7   PHSRDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQALS 66
           P  +D +  ++    A IEF   G ++ AN LFL  +GY L E+ G+HHRIFC   +  S
Sbjct: 13  PSHQDNIVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQS 72

Query: 67  TAYAALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPSK 126
             Y   W  LAQG   +G + R  K G  + L+ATY P+   +G+V  ++KIA+D T  +
Sbjct: 73  QQYQQFWTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVT-EQ 130

Query: 127 ILRAE 131
            L AE
Sbjct: 131 YLHAE 135