Pairwise Alignments

Query, 203 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

Subject, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 3e-44
 Identities = 97/241 (40%), Positives = 128/241 (53%), Gaps = 51/241 (21%)

Query: 12  AVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQALSTAYAA 71
           AV+ ++ RS A+I+F PDGTI  AN+ FL   GY L EIVG+HHR+FCD+          
Sbjct: 149 AVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDD--RFYKENPN 206

Query: 72  LWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTP------- 124
            W +LA+G+F +G + R  +HG+D+WL+ATYNP+FN  G V +++K A+D T        
Sbjct: 207 FWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKAHA 266

Query: 125 ------------------------------------------SKILRAELKSTVDGLVDI 142
                                                     +  L  +L S    +  I
Sbjct: 267 TKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRITQI 326

Query: 143 VETISGIANQTNLLALNATIEAARAGEAGRGFAVVAAEVKKLAGDTRAATDRARAMVVAS 202
           V TI+ IA QTNLLALNA IEAARAGE GRGFAVVA EV+ LA +T  AT     +V  +
Sbjct: 327 VTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDNIVKRN 386

Query: 203 S 203
           S
Sbjct: 387 S 387



 Score =  113 bits (282), Expect = 6e-30
 Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 1/122 (0%)

Query: 6   HPHSRDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQAL 65
           H H  D V  A+ R+ A IEF P G IL AN LFL+ MGY   E++G+HH+IFCD     
Sbjct: 22  HNHDSDIV-SALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVN 80

Query: 66  STAYAALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPS 125
           S  YA  W  LAQG      + RL K G  IW++ATY PV N  G V +++K+A D T +
Sbjct: 81  SLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKA 140

Query: 126 KI 127
           KI
Sbjct: 141 KI 142