Pairwise Alignments

Query, 203 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (298), Expect = 1e-31
 Identities = 58/130 (44%), Positives = 82/130 (63%)

Query: 10  RDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQALSTAY 69
           R    +A+  +QAVIEF  DGTIL AN  FL T+GY L EI GRHH +F DE    S  Y
Sbjct: 184 RSGQMNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEY 243

Query: 70  AALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPSKILR 129
              W +L  G+F   EY+R  K G++IW+QA+YNP+ ++EG+  +++K AT+ T  K++ 
Sbjct: 244 QHFWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVV 303

Query: 130 AELKSTVDGL 139
            E+K  +  L
Sbjct: 304 NEVKRVMTAL 313



 Score = 70.1 bits (170), Expect = 9e-17
 Identities = 35/73 (47%), Positives = 49/73 (67%)

Query: 127 ILRAELKSTVDGLVDIVETISGIANQTNLLALNATIEAARAGEAGRGFAVVAAEVKKLAG 186
           +  A +  +   + DI+  I GIA QTN+LALNA +EAARAGE GRGF+VVA+EV+ LA 
Sbjct: 430 VTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQ 489

Query: 187 DTRAATDRARAMV 199
            +  A    +A++
Sbjct: 490 RSANAAKDIKALI 502



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 4/153 (2%)

Query: 7   PHSRDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQALS 66
           P    A    I    A++E  P+GTI +A+D F      +   +VG          Q  S
Sbjct: 62  PQVNQAFVQVIREHLALLECEPNGTICYASDAFAHLCRVSAEAMVGADFANLWRTHQQPS 121

Query: 67  TAYAALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPSK 126
                L     +G   + E  +L +    IW++A   P+    G+++ ++ +  D T +K
Sbjct: 122 V--QRLLQDAKKGHPVSAEL-QLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQDITAAK 178

Query: 127 ILRAELKSTVDGLVDIVETISGIANQTNLLALN 159
           + + +    ++  V++ + +        +L  N
Sbjct: 179 LEKIDRSGQMNA-VNLTQAVIEFTLDGTILTAN 210