Pairwise Alignments

Query, 944 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 959 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 91.7 bits (226), Expect = 2e-22
 Identities = 93/273 (34%), Positives = 124/273 (45%), Gaps = 36/273 (13%)

Query: 113 SAVRRRPLAIQFAQASGTATLDGLAMAPAPEPAAESAP---IIVTGTRQTTRTVAESLAP 169
           S  RR  LA+Q +       +  LA A  PEPA  +     + VTGTR  T  + +   P
Sbjct: 5   SGSRRSCLAVQLS----LCLIPSLAWAQQPEPAPSTRTLDSVQVTGTRIKTAEL-QGQVP 59

Query: 170 IDVLGEKDLEASGKQSVRDLLGTLVPS-------INVSNN--------GAGASWAVRTLS 214
           I  L   D+E +G  S+ ++L  L  S        N S N        G GA  A   + 
Sbjct: 60  IQTLNRADIERTGLTSIGEVLQELTASGSALNAKFNSSGNFGFPPDDSGVGAGSA--QVD 117

Query: 215 LRGLGGDQLLVLVNGKRRHNTATLFINGSVQNGQ-SPPDLDLIPGNAIQRIEVLRDGASA 273
           LR LG  ++LVLV+G R       ++N S  +G  S  DL+ IP   ++RIEVL DGAS+
Sbjct: 118 LRHLGSKRVLVLVDGIR-------WVNESSASGVGSSTDLNTIPLAIVERIEVLEDGASS 170

Query: 274 QYGSDAIAGVVNIILKNDTQGGAALTMGSTADNGGWQGRWQIDKGFAIGPDGGYIHLSGE 333
            YGSDAIAGVVNII +  T  GA +T+       G      +D  +    +   + L   
Sbjct: 171 LYGSDAIAGVVNIITRR-TFDGAQVTLNYGQYGKGDGTNQGMDLAWGTSGEDFSLFLGAS 229

Query: 334 GVLQDNTVVNSSPITSNPFYPTG--DARNADPD 364
            V QD            P   TG   A +A PD
Sbjct: 230 YVKQDPIYARDRAQARFPIPGTGLTFASSATPD 262



 Score = 67.0 bits (162), Expect = 6e-15
 Identities = 122/494 (24%), Positives = 200/494 (40%), Gaps = 93/494 (18%)

Query: 496 WTSNLDFSKELDIGLAGPLSVAVGAEYKKNKFLIGPGDPESYIDGGYVSPAGSWFAGATR 555
           +T+NL  S EL     G +S A G EY+K +    P DP        ++ AG +      
Sbjct: 514 FTANL--SSELFQLPGGAVSFATGYEYRKYEGSYQP-DP--------LTVAGRY------ 556

Query: 556 TGVGSQGVTGFLPEGSGSWSRDNWSAYINLEGQIV------EGLEFGLAGRHEDYSDFGT 609
            GV S   +G         S D   AY+ L   I       + L+  +AGR+ DYS FG 
Sbjct: 557 NGVPSLPTSG---------SYDVNEAYLELNIPIFANSTLGDKLDLNIAGRYSDYSTFGG 607

Query: 610 TDTGKASLRIEPFRGFAIRGTASTGFRAPTLQQQHYASSSTINVTVN-----GVNQLLP- 663
             T K  LR +    F +R + + GFRAPT+ +  + S++  ++ ++     G+    P 
Sbjct: 608 EFTPKYGLRWQVSDEFVLRTSYAEGFRAPTIGEL-FGSAARADLQLSDPCSIGLGGTAPR 666

Query: 664 -------VQALPVD------GVAARALGAQPLKPEKSTNFSAGIVLTPAPNFN------- 703
                     +PV+       ++    G + L+PE+S +FSAG V +P    N       
Sbjct: 667 GSAANCATLGVPVNYQQANQQISVTTGGNEQLEPERSRSFSAGFVFSPGFGSNASWSDRL 726

Query: 704 ---VTVDAYQIKVRDRILLSETLSGPVV--MDALAAAGI-QGIAGGLIFSNAADTRTRGL 757
              VT   + +    + + ++T     V  +DAL   GI +   GG+   NA + R   L
Sbjct: 727 DLEVTFYRHHVDGAIQAINAQTQLDLCVDTLDALYCDGIGRASTGGI---NAFNNRLTNL 783

Query: 758 DIVSTYRAGLGDLGTATISLSANFNKTIFTHLDPVPDEIAASGLVLIGRAKQGD----LS 813
             + T    +    T   S    F  +         + + A+G     R  QG     + 
Sbjct: 784 GSIKTDGWDVDLFWTLPESALGRFKLSWQNTFVGRYEALGAAG----QRQPQGPGIEVVD 839

Query: 814 EGTPRDKLIGNILWEKGDFNLNLRATRYGKIYQRASAAVYHTEDFQSCTANSPGCLYDYV 873
              P       + W  G++  +  A    K+ ++   AV    +F  C+  + G      
Sbjct: 840 SAIPEWTSNAVLDWSLGNWTASWTARHISKLTEQCGDAV----EFAVCSTPAEG------ 889

Query: 874 DEKLSPKTILDLELGYRL--AKGVKLSVGANNLLNTYPNKLKPVNRTAGSLYNAYAPYGI 931
             +L   T  D ++GYR    KG++L+ G NN+ +  P    P+  +        + Y I
Sbjct: 890 TNQLDAITYHDAQVGYRFDWLKGLQLTAGLNNVFDKDP----PICLSCSLNGYDASTYDI 945

Query: 932 SGG-FYYGRLNLEF 944
            GG  +Y R +L+F
Sbjct: 946 PGGRSWYVRADLKF 959