Pairwise Alignments

Query, 560 a.a., Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007) from Sphingobium sp. HT1-2

Subject, 383 a.a., isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score =  217 bits (552), Expect = 7e-61
 Identities = 139/389 (35%), Positives = 201/389 (51%), Gaps = 14/389 (3%)

Query: 173 LDEMFDMVRDQFFALSNEKVAPFAHEWHLKDELIPLPLVQELGEMGVFGMTIPEEFGGLG 232
           L E   M+RD     +  ++AP A  W  K   I   LV ++GE+G+ GM +PEE+GG  
Sbjct: 6   LSEDQRMIRDMARDFARREIAPHAQAWE-KAGWIDDTLVAQMGELGLLGMVVPEEWGGSY 64

Query: 233 MGKTAMCVVSEELSRGWIGVGSLAT-RSEIAAELFLTGGTAEQKAHWLPQIANAAILPTA 291
           +   A  +  EE+S G    G+L +  + +     L  G+  QK  WL ++A+   +   
Sbjct: 65  IDYVAYALAVEEISAGDGATGALMSIHNSVGCGPVLNYGSQAQKDEWLTELASGRAIGCF 124

Query: 292 VFTEPDTGSDLGALRTRATLADGEYRVSGNKTWITHAARADVMTLLVRTDPDTRNYSGLS 351
             TEP  GS+   LRTRA L DG + ++G+K + ++A R+ +  +   TDP+     GLS
Sbjct: 125 ALTEPQAGSEAHNLRTRAELVDGHWVLNGSKQFCSNAKRSKLAIVFAVTDPELGK-KGLS 183

Query: 352 MLIAPKQRGTVDTPFPTPGMSGGEIE-VIGYRGMKEYEIGFDDFRVPAANLLGGVEGQGF 410
             + P           TPG +    E  +G R      +   D R+P ANLLG   G+G 
Sbjct: 184 AFLVPTD---------TPGFAVERSEHKMGIRASDTCGVSLSDCRIPEANLLGE-RGKGL 233

Query: 411 KQLMATFESARIQTAARAIGVAQAALDIGLSYALDRKQFGRPIFDFPRVANKLAMMAAEI 470
              ++  E  RI   A+A+G+A+AA +  L YA +R QFG+PI +   +AN LA M  ++
Sbjct: 234 AIALSNLEGGRIGIGAQALGIARAAFEAALLYARERVQFGKPIAEHQSIANMLADMQTQL 293

Query: 471 MGARQLTYFAARRKDEDKRCDLEAGMAKLIGARVAWAAADNALQIHGGNGFATEYQVSRL 530
             AR L   AAR K     C  EA  AKL  + +A      A+QIHGG G+  +Y V R 
Sbjct: 294 NAARLLILHAARLKSAGLPCLSEASQAKLFASEMAEKVCSQAVQIHGGYGYLEDYPVERY 353

Query: 531 LADARILNIFEGAGEIQAQVIARRLLDEA 559
             DARI  I+EG+ EIQ  +IAR L + A
Sbjct: 354 YRDARITQIYEGSSEIQRLLIARELANYA 382