Pairwise Alignments

Query, 560 a.a., Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007) from Sphingobium sp. HT1-2

Subject, 378 a.a., acyl-CoA dehydrogenase from Dechlorosoma suillum PS

 Score =  219 bits (559), Expect = 1e-61
 Identities = 137/383 (35%), Positives = 205/383 (53%), Gaps = 14/383 (3%)

Query: 178 DMVRDQFFALSNEKVAPFAHEWHLKDELIPLPLVQELGEMGVFGMTIPEEFGGLGMGKTA 237
           +M+RD   A + E++APFA EW  K+   P   ++ELGE+G  GM +PEE+GG GM   +
Sbjct: 8   EMIRDSMRAFAQERLAPFAAEWD-KNHTFPAEALKELGELGAMGMCVPEEWGGAGMDYMS 66

Query: 238 MCVVSEELSRGWIGVGSLAT-RSEIAAELFLTGGTAEQKAHWLPQIANAAILPTAVFTEP 296
           + +  EE++ G     ++ + ++ +A  +    GT +QK  WL  +A    L     TEP
Sbjct: 67  LVLTLEEIAAGDGATSTIVSVQNSLACGITQKYGTDQQKEEWLKPLARGEKLGCFCLTEP 126

Query: 297 DTGSDLGALRTRATLADGEYRVSGNKTWITHAARADVMTLLVRTDPDTRNYSGLSMLIAP 356
            TGSD  A+ TRA      + ++G K +IT    A +  +   TD       G+S  + P
Sbjct: 127 HTGSDAAAITTRADRDGDHFVLNGVKQFITTGKHAHMAIVFAVTDK-AAGKKGISCFLVP 185

Query: 357 KQRGTVDTPFPTPGMSGGEIEV-IGYRGMKEYEIGFDDFRVPAANLLGGVEGQGFKQLMA 415
                      T G   G  E  +G       +I F+D RVPA+ LLG  EG+G+K  ++
Sbjct: 186 TD---------TKGFIVGRTEEKMGQHASDTVQIIFEDCRVPASALLGK-EGEGYKIALS 235

Query: 416 TFESARIQTAARAIGVAQAALDIGLSYALDRKQFGRPIFDFPRVANKLAMMAAEIMGARQ 475
             E+ RI  AA++IG+A+AA +  + YA +R  FG+PI +   V  +LA M   +  AR 
Sbjct: 236 NLEAGRIGIAAQSIGMARAAFEAAVRYAKERVTFGQPIIEHQAVNFRLADMNTLLDAARL 295

Query: 476 LTYFAARRKDEDKRCDLEAGMAKLIGARVAWAAADNALQIHGGNGFATEYQVSRLLADAR 535
           + + AA  KD  K C  EA MAK+  +  A   A +A+QIHGG G+ +++ V R+  D R
Sbjct: 296 MVWRAAALKDAGKPCLKEASMAKMFASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVR 355

Query: 536 ILNIFEGAGEIQAQVIARRLLDE 558
           I  I+EGA +IQ  VI R +  E
Sbjct: 356 ISQIYEGANDIQRLVIGRSIAQE 378