Pairwise Alignments

Query, 699 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Sphingobium sp. HT1-2

Subject, 631 a.a., Penicillin-binding protein 2 (PBP-2) from Pseudomonas fluorescens FW300-N2E2

 Score =  314 bits (804), Expect = 9e-90
 Identities = 204/564 (36%), Positives = 307/564 (54%), Gaps = 25/564 (4%)

Query: 37  LLVGRMGWISIAENEKYQLLSESNRVNLTLIPPRRGWIVDRNGRPLANNRTDFRVDLIPQ 96
           +L+ R+ ++ + + E +  LSE+NRV++  IPP RG I DRNG  +A+NR  F + +  +
Sbjct: 34  VLIARLYFLQVIQYEYHSTLSENNRVHVQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRE 93

Query: 97  RIVDAEATVGHLAQLLSLQPDDVDRIKEELDKSAG-FRPVQVADKLTYDQFAAVSVRLTD 155
           R  D +  +  + ++L L P+D    ++ + +    F PV +  +LT +Q A ++V    
Sbjct: 94  RSGDWQHVLDVIVEVLQLTPEDRAIFEKRMRQGRRPFEPVPILFELTEEQIALIAVNQFR 153

Query: 156 LPGVAPSQGFSRHYPAGATVGHLLGYVGAATAEDYKKRKDPLLITPGFKVGKDGLERAYD 215
           LPGV       RHYP G    H +GY+G    ++ K   DP+  +    +GK G+ER Y+
Sbjct: 154 LPGVEVVAQLVRHYPQGPHFAHSVGYMGRINEKELKTL-DPVNYSGTHHIGKTGIERFYE 212

Query: 216 EHLTGKPGAKRVEVTARGKIVRELTTRPDTPGNPIKLTIDAGLQEYAGRRLATQSGAVVV 275
             L G+ G + VE  ARG+++R L      PG  I L++D  LQE A   L  + GAVV 
Sbjct: 213 PELHGQVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSLDIKLQEAAEAALGGRRGAVVA 272

Query: 276 IDCHNGDVLACASMPSFDPNSFSDGISHLEWEMLSKDDHVPLRNKVLQGLYPPGSTVKPM 335
           +D + G+VLA  S PSFDPN F  GIS   +  L      PL N+VL+GLYPPGST+KP 
Sbjct: 273 LDPNTGEVLAMVSQPSFDPNLFVTGISFKAYAELRDSIDRPLFNRVLRGLYPPGSTIKPA 332

Query: 336 VALALLEAGVSPAET-VSCGGAIRVGNTLFHCHKKR-----GHGPLNMRGAIAQSCDIYF 389
           VA+A L++GV  A + V   G  ++ N   + HK R     G G +++  AI +S D YF
Sbjct: 333 VAIAGLDSGVVTASSRVYDPGYYQLPN---YDHKYRNWNRTGDGYVDLETAIMRSNDTYF 389

Query: 390 YQMAQRIGMDRIASMARRVGMGQRFDLPFPSQSYGTVPDPTWKLKKYNQKWQVYDTVNAT 449
           Y +A ++G+DR++S   + G+GQ+  L    +S G +P   WK     Q W   +T+   
Sbjct: 390 YDLAHKLGIDRLSSYMNKFGLGQKVSLDMFEESPGLMPSREWKRATRRQAWFPGETLILG 449

Query: 450 IGQGYMLINPLQMAVMAARLAT-GRQLMPNF---LHGA----ARPEPALVGVPEEHLVTI 501
           IGQGYM   PLQ+A   A +A+ G+   P+    + G       P P ++         +
Sbjct: 450 IGQGYMQATPLQLAQATALVASKGKWYRPHLAKTIEGQKPVDPDPMPDIILRNPSDWQKV 509

Query: 502 RDAMSAVVNGGGTGGAARMSI-PDVLIAGKTGTAQVRRITMAERAGGVRGNAGLPFKLRD 560
            + M  V++ G  G A + SI     IAGK+GTAQV  I   E+       + +  + RD
Sbjct: 510 NNGMQQVMH-GARGTARKASIGAQYRIAGKSGTAQVVAIKQGEK----YDRSKVQERHRD 564

Query: 561 HALFQGFAPFDNPRYAIACIIEHG 584
           HALF GFAP DNP+  ++ ++E+G
Sbjct: 565 HALFVGFAPADNPKIVVSVMVENG 588