Pairwise Alignments

Query, 699 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Sphingobium sp. HT1-2

Subject, 633 a.a., penicillin-binding protein 2 from Klebsiella michiganensis M5al

 Score =  313 bits (802), Expect = 2e-89
 Identities = 204/588 (34%), Positives = 297/588 (50%), Gaps = 23/588 (3%)

Query: 16  QSFTFSRRAMVVGGLQGAIGALLVGRMGWISIAENEKYQLLSESNRVNLTLIPPRRGWIV 75
           +S  F RRA+V       +  +L+  +  + I     YQ  S  NR+ L  IPP RG I 
Sbjct: 13  ESSLFVRRALVAFLGILLLTGVLIANLYNVQIVRYTDYQTRSNENRIKLVPIPPSRGIIY 72

Query: 76  DRNGRPLANNRTDFRVDLIPQRIVDAEATVGHLAQLLSLQPDDVDRIKEELDKSAGFRPV 135
           DRNG PLA NRT ++++++P+++ + + T+  L  ++ L  DDV   K+E  +S  F  +
Sbjct: 73  DRNGTPLALNRTIYQLEMMPEKVDNVQQTLDALRDVIDLTDDDVANFKKERARSHRFTSI 132

Query: 136 QVADKLTYDQFAAVSVRLTDLPGVAPSQGFSRHYPAGATVGHLLGYVGAATAEDYKKR-K 194
            V   L+  Q A  +V     PGV       R+YP  + + H++GYV     +D  +  K
Sbjct: 133 PVKVNLSEVQVARFAVNQYRFPGVEVKGYKRRYYPYNSALTHVIGYVSKINDKDVDRLDK 192

Query: 195 DPLLITPG--FKVGKDGLERAYDEHLTGKPGAKRVEVTARGKIVRELTTRPDTPGNPIKL 252
           +  L        +GK G+ER Y++ L G+ G + VEV  RG+++R+L   P   G  I L
Sbjct: 193 EGKLANYASTHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGRDIYL 252

Query: 253 TIDAGLQEYAGRRLATQSGAVVVIDCHNGDVLACASMPSFDPNSFSDGISHLEWEMLSKD 312
           T+D  LQ+Y    LA    AVVV D   G +LA  S PS+DPN F DGIS  ++  L  D
Sbjct: 253 TLDLKLQQYIETLLAGSRAAVVVTDPRTGAILALVSTPSYDPNLFVDGISSKDYSGLLND 312

Query: 313 DHVPLRNKVLQGLYPPGSTVKPMVALALLEAGVSPAETVSCGGA---IRVGNTLFHCHKK 369
            + PL N+  QG+YPP STVKP VA++ L AGV    T         +   +  +   KK
Sbjct: 313 PNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPGWWQLPGSDKRYRDWKK 372

Query: 370 RGHGPLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQRFDLPFPSQSYGTVPDP 429
            GHG LN+  A+ +S D YFYQ+A  +G+DR++    + G G    +    +  G +P  
Sbjct: 373 WGHGHLNVTKALEESADTYFYQVAYDMGIDRLSEWMGKFGYGHYTGVDLAEERSGNMPTR 432

Query: 430 TWKLKKYNQKWQVYDTVNATIGQGYMLINPLQM-AVMAARLATGRQLMPNFLHGAARP-- 486
            WKLK++ + W   DT+   IGQGY    P+QM   +   +  G   +P+ L        
Sbjct: 433 EWKLKRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALMILINDGVVKVPHLLQSTVEDGK 492

Query: 487 --------EPALVGVPEEHLVTIRDAMSAVVN-GGGTGGAARMSIPDVLIAGKTGTAQVR 537
                   EP +  +        +D M  V N G GT      S P   IA K+GTAQV 
Sbjct: 493 PVPWVQPHEPPVGDIHSGFWEIAKDGMFGVANRGNGTAHKYFASAP-YKIAAKSGTAQVF 551

Query: 538 RITMAERAGGVRGNAGLPFKLRDHALFQGFAPFDNPRYAIACIIEHGG 585
            +   E     R    +  +LRDH L   FAP++NP+ A+A I+E+GG
Sbjct: 552 GLKANETYNAHR----IAERLRDHKLMTAFAPYNNPQVAVAIILENGG 595