Pairwise Alignments

Query, 1293 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 346 a.a., phage tail tape measure protein from Vibrio cholerae E7946 ATCC 55056

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 60/209 (28%), Positives = 88/209 (42%), Gaps = 26/209 (12%)

Query: 116 GAAIVAVGTAVTSATAQVQAYKASLTTIIGDTEKAGLAFDALADFAQRTPFTLDEAVNGF 175
           GAA V          A+ + Y+  L  + G  E    A   + +F Q TP+ +DE    F
Sbjct: 65  GAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSF 124

Query: 176 VKLSALGLKPSEEAMTSYGNTAAAMGKSLEQMVEAVADA----------STSEFERLKEF 225
           V+L A G+ P +  M S  + AA +G + E  VE +A A           + E  +L E 
Sbjct: 125 VRLKAFGIDPMDGTMQSIADQAAMIGGTAE-TVEGIATALGQAWTKGKLQSEEALQLLER 183

Query: 226 G-------IKSKQE---GDKVSFTFQGV--TTQVGNNAADIQKYLIGIGNTQFAGGMDRQ 273
           G       IKS +E    +   FT + +   +  G    D  + LI     + AG    Q
Sbjct: 184 GVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAAKEQ 243

Query: 274 AQTIGGAIAALGDQIFILFAK--IGQGGF 300
             T  G I+ +GD  + LF K  +G G F
Sbjct: 244 MNTWNGMISNMGDH-WKLFQKDVMGSGAF 271