Pairwise Alignments

Query, 822 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 1341 a.a., prophage LambdaSo, host specificity protein J, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 62.0 bits (149), Expect = 2e-13
 Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 22/252 (8%)

Query: 427  SALHIQGAAVQAKATVALHEQNLIAIQSLSTRIEDDGALVAEQLTQLTTRVENSEDRIES 486
            S +   G   +  A  A  E    +I++++  I+ + A +  +     T  E+   +I S
Sbjct: 985  STVVFAGVWSEQYARAAADEALAKSIETVAATIDKNAAAIITEQMARATADESLAKQIIS 1044

Query: 487  GFQEINRTIA----------DADEALAESITAQIANFGEDVNASINEERIARATAVDAVA 536
                +N   A          DAD AL + I    A  G +  A+I +E+ ARA A  A+ 
Sbjct: 1045 ISATVNGNAALIKQEQTARADADSALGQRIDTVQATTGANT-AAIQQEQTARANADSALG 1103

Query: 537  RDLDEMSGRVSTLSEDLSGEILDSRQLTIDKDGAMARRVDALGVRIDDEVADRSAAIRTV 596
            + +D +       +  +  E    +    + D A+ +R+D     +       +AAI+  
Sbjct: 1104 QRIDTVQATTGANTAAIQQE----QTARANADSALGQRIDT----VQATTGANTAAIQQE 1155

Query: 597  EEAVADETEARASAIQTIESTYGDRIAAVEIEASTATDALDN-LNAQYTVKVQSTLADGT 655
            + A A+   A    I T+++T G   AAV+ + STA   LD  L A Y++KV  T ADG 
Sbjct: 1156 QTARANADSALGQRIDTVQATAGANTAAVQ-QTSTALAELDGKLQAMYSIKVGVT-ADGK 1213

Query: 656  TVFGGFGVANQN 667
                G  +  +N
Sbjct: 1214 YYGAGMAIGVEN 1225