Pairwise Alignments

Query, 627 a.a., Signal peptide peptidase SppA (protease 4) from Sphingobium sp. HT1-2

Subject, 343 a.a., putative periplasmic protease (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 4/194 (2%)

Query: 353 LVVRVDSPGGSVQASEKIRRAIMEAKSGGLPIVVSMGNVAASGGYWVSTPADIVFAEPDT 412
           +VV V+S GG V         +   +S  +P+ + +  VAASGGY ++  A+ ++A P  
Sbjct: 132 VVVNVESGGGMVHGYGLAASQLDRLRSAEIPLTICVDKVAASGGYMMACVANTIYAAPFA 191

Query: 413 ITGSIGVFGIIPSFEGTLAKMGITTDGVRTTPLSGQPDIAGGTTPQFDQIMQMGVEDIYR 472
           I GSIGV   IP+F   L K  I  +            + G  T +  Q  Q  +E+ + 
Sbjct: 192 IVGSIGVVAQIPNFNRLLKKHDIDYEQHTAGDFKRTLTLFGENTDEGRQKFQEELEETHV 251

Query: 473 RFVGLVAQARHKTPAQIDTIAQGRVWDGGTARQIGLIDRFGDLNDAIAEAARRAKIDPAK 532
            F   +  ++++    I  +A G  W G  A  +GL+D     +D + + A    +   K
Sbjct: 252 LFKAFI--SKYRPTLDIAKVATGEHWYGQQALDLGLVDGLSTSDDVVMKLAEEKTV--IK 307

Query: 533 AKPYWIEKQPDKFA 546
            +    +K  DK A
Sbjct: 308 VRYQLKKKIADKLA 321