Pairwise Alignments

Query, 691 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (593), Expect = 3e-65
 Identities = 180/540 (33%), Positives = 258/540 (47%), Gaps = 41/540 (7%)

Query: 109 KLPAHVPQAFMAIEDRRFYDHWGVDPRGIARAMWHNIWSDGSSQGGSTITQQLAKGVFLS 168
           + P  +  A +  EDR FY H GV P  I RAM  N+ +  + QGGST+TQQLAK +FLS
Sbjct: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLS 246

Query: 169 SDRTMGRKAREALIAFWLEAWLTKDQILERYLSNVYFG----DNVYGLRAASLHYFDRQP 224
           SDRT+ RK REA +A  ++   +KD+ILE YL+ VY G    D ++G   AS  YF +  
Sbjct: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPL 306

Query: 225 ERLTISQAAMLAGLLKAPSRLAPTSNLKGARARAALVTQAMVEAGYISKAQRDQLAPARL 284
           + L I Q A+L G++K PS   P    + AR R  LV + M+E   ++  +  Q     L
Sbjct: 307 QELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPL 366

Query: 285 DVRESPDATS--GTYFADWVLPEARDRAGAVYGAQ---EVKTTLDWRIQRLAEAAI---- 335
           DV+++    S    YF   V  E +++ G  + A     V T+LD   Q   E AI    
Sbjct: 367 DVQKTAQIASRQPAYFQQ-VSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQI 425

Query: 336 -RRAPLGGAQVALVAMKPD---GSVVAMIGGKNYEKSSFNRAVQAKRQPGSTFKLFVYLA 391
            + A   G  +   A+  D   G + AM+GGK      FNR + A RQ GS  K  VYL 
Sbjct: 426 PQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLT 485

Query: 392 AFRAGMTPDD-----MIEDTPITT-----GTYRPANHGGKYRGRITLRQAFAASSNVAAV 441
           A      PD       +ED P+T        + P N+  +YRG + L  A A S NV  V
Sbjct: 486 AL---AHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTV 542

Query: 442 RLTQKVGVDNVIKVARDLGVTAPLTEDL-SLALGTSEIPLVELAEAYASVA----AGAYP 496
            L  K+G+D V      LGV       + S+ LG+  +   ++A+ Y ++          
Sbjct: 543 ALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLS 602

Query: 497 VLAHGLPPEEQGWFDRLMKRQRHFSDDQLEMIRDLLSSAANRGTG---SAAALRTSTFGK 553
            L   L  E    ++ L +  +        +    +      GTG   +A     +  GK
Sbjct: 603 ALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGK 662

Query: 554 TGTTQDSRDAIFVGYAGGLVTAVWIGNDDNAPLPGGAAGGGVPARIWRNFMAGAINEPVE 613
           TGTT D+RD+ FVG  G  VT +W+G DDN P     A G +  R++  ++   I E ++
Sbjct: 663 TGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGAL--RVYAQYLKYRIPEKLQ 720