Pairwise Alignments

Query, 691 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

Subject, 768 a.a., penicillin-binding protein 1B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (562), Expect = 1e-61
 Identities = 169/509 (33%), Positives = 249/509 (48%), Gaps = 30/509 (5%)

Query: 105 VEVAKLPAHVPQAFMAIEDRRFYDHWGVDPRGIARAMWHNIWSDGSSQGGSTITQQLAKG 164
           V   ++P  + QA + +EDR FY+H GV+P  I RA + NI +  + QGGST+TQQLAK 
Sbjct: 176 VSTEEMPKPIVQALLLVEDRSFYEHHGVNPFAILRAAFVNITAGRTVQGGSTLTQQLAKN 235

Query: 165 VFLSSDRTMGRKAREALIAFWLEAWLTKDQILERYLSNVYFGDN----VYGLRAASLHYF 220
            FLSS+R++ RK REAL+A  ++   +KD+ILE YL+ VY G +    V+G+  AS  YF
Sbjct: 236 FFLSSERSLLRKVREALMAVIIDFRYSKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYF 295

Query: 221 DRQPERLTISQAAMLAGLLKAPSRLAPTSNLKGARARAALVTQAMVEAGYISKAQRDQLA 280
            R    LT +Q A L   +K PS   P    + +  R  LV + ++E+G ++ AQ     
Sbjct: 296 GRPIGELTTAQQAFLVAAIKGPSYYNPWRYPERSLERRDLVLRLLMESGELNTAQYKVAV 355

Query: 281 PARLDVRES--PDATSGTYFADWVLPEARDRAGAVYGAQ---EVKTTLDWRIQRLAEAAI 335
            + L +R +  P       F   V  E   R G     Q   ++ TTLD   Q  AE A+
Sbjct: 356 ESPLGLRNANKPVHQKLPSFYALVKQEVNQRYGDALLKQSGVKIYTTLDPMAQEAAEIAV 415

Query: 336 RRAPLG------GAQVALVAM-KPDGSVVAMIGGKNYEKSSFNRAVQAKRQPGSTFKLFV 388
            +            Q+ +V   K  G + AM+G K      +NRAV+ +R  GS  K FV
Sbjct: 416 TQTFKSLDKGNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNRAVEIRRPIGSLIKPFV 475

Query: 389 YLAAF--RAGMTPDDMIEDTPITT-----GTYRPANHGGKYRGRITLRQAFAASSNVAAV 441
           Y  A    +  T    ++D PIT       T+ P N    + G+++L  A   S NV  V
Sbjct: 476 YATALAPNSQFTLASPLKDQPITLKNEQGKTWSPQNFDKTFSGQVSLLTALKKSMNVPTV 535

Query: 442 RLTQKVGVDNVIKVARDLGVTAPLTEDLSLALGTSEIPLVELAEAYASVA-AGAY---PV 497
            L   VGVD V+      G   PL E  S+ LG      + +A+ Y ++A +GAY     
Sbjct: 536 NLGIAVGVDAVVTTLAKSGWEEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGAYRKLTT 595

Query: 498 LAHGLPPEEQGWFDRLMKRQRHFSDDQLEMIRDLLSSAANRGTGSA---AALRTSTFGKT 554
           +   L  + Q        +++  + D   +++  +      GT +    A    +  GKT
Sbjct: 596 VTAVLDSDNQPLPVTRSAKEQAITPDTDFLVQYAMQQVVRSGTATRLGNAFPGVALAGKT 655

Query: 555 GTTQDSRDAIFVGYAGGLVTAVWIGNDDN 583
           GT+ DSRD+ F G+    V A+W+G DDN
Sbjct: 656 GTSNDSRDSWFAGFDERNVAAIWVGRDDN 684