Pairwise Alignments

Query, 193 a.a., Serine recombinase, PinQ/PinR-type from Sphingobium sp. HT1-2

Subject, 179 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

 Score = 91.3 bits (225), Expect = 9e-24
 Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 11/182 (6%)

Query: 7   YCRVSTIDQTTDNQMLEIAGAGFTVEPQRIIAETVSGSVAAVERKGWQLLLHKLEAGDVL 66
           Y RVS  DQ  D Q   +  AG     +RI ++ +SG+ A+  R G    L     GDVL
Sbjct: 5   YARVSRDDQQLDLQHDALTAAGC----ERIFSDKMSGAKAS--RPGLDEALAFARPGDVL 58

Query: 67  IVTKLDRLGRNAMDVRQTVERLAAMGVRVHCLALGGVDLTSAAGKMTMSVIIAVAEFERD 126
           +V +LDRLGR+  ++ +    L A GV +  L    +D TSAAG++   V  A+AEFER+
Sbjct: 59  VVWRLDRLGRSMSELLRLTANLEASGVGLESLK-EQIDTTSAAGRLVFHVFAAMAEFERN 117

Query: 127 LLVERTNAGLQRAKAQGKALGPKRKADGQTVAAWRA---DRGATISQTMEHFGISKASVM 183
           L+ ERT AGL+ A+A+G+  G +     +T+AA +A   D+  T  +  +   IS++++ 
Sbjct: 118 LIRERTFAGLEAARARGRQ-GGRPGVPPETIAAIQALAGDQNRTPDEICKALKISRSTLY 176

Query: 184 RF 185
           ++
Sbjct: 177 KY 178