Pairwise Alignments

Query, 193 a.a., Serine recombinase, PinQ/PinR-type from Sphingobium sp. HT1-2

Subject, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 9e-30
 Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 3/184 (1%)

Query: 3   RIFAYCRVSTIDQTTDNQMLEIAGAGFTVEPQR-IIAETVSGSVAAVERKGWQLLL-HKL 60
           R + Y RVST +QTT  Q+  I  AG  V   R I+ E VSG V A+ER  ++ L+ +KL
Sbjct: 119 RTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKL 178

Query: 61  EAGDVLIVTKLDRLGRNAMDVRQTVERLAAMGVRVHCLALGGVDLTSAAGKMTMSVIIAV 120
           E GD L++ KLDRLGR+ +DV+Q V+ L   G+++  L L   DL+S  GK+ + +    
Sbjct: 179 EKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATF 238

Query: 121 AEFERDLLVERTNAGLQRAKAQGKALGPKRKADGQTVAAWRADRGATISQTMEHFGISKA 180
           AEFE++ + ER    L++ K +GKALG   K     V   +A +G +     +   +S +
Sbjct: 239 AEFEKNRISERIRDKLKQLKQEGKALGRPTKNVYDDVQELKA-QGISQRTIADKLNVSLS 297

Query: 181 SVMR 184
           +V R
Sbjct: 298 TVRR 301