Pairwise Alignments

Query, 360 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Sphingobium sp. HT1-2

Subject, 371 a.a., DNA-protecting protein DprA from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 3e-50
 Identities = 117/281 (41%), Positives = 157/281 (55%), Gaps = 5/281 (1%)

Query: 81  YPALLAEMEGAPPALIVRGDAAIAARPCIAMVGARNASAAACRFARILAQQLGDRGAVVV 140
           YP LL E+  +PP L + G       P +A+VG+RNAS    + AR  A +L   G VV 
Sbjct: 87  YPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGSRNASVDGRQIARQFATELAQSGLVVT 146

Query: 141 SGLARGIDTEAHRGSIDSG--TIGVIASGIDIGFPPENAALQEDVAQRGLLVTEHPPGTQ 198
           SGLA GID  AH G++ +   T+ V+ SG+   +P ++  L E +  +G LV+E  P T 
Sbjct: 147 SGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVYPKQHQGLAERIIAQGALVSEFAPHTP 206

Query: 199 PLARHFPARNRIIAGLALGTVVVEAAPKSGSLITARLATEAGREVMAVPGSPLDPRAQGC 258
           P A HFP RNRII+GL+LG VVVEAA KSGSLITAR A E GREV  VPGS  +  +QG 
Sbjct: 207 PKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITARYAAEQGREVFVVPGSIFNAASQGS 266

Query: 259 NLLIREGATLVQNADDI-LEAVGGLDPRMVRQGSFD-FIGQPVSSDVADADRAAVIALLG 316
           N LIR+GA LVQ+   I  E    L   +  Q  +   +   V SD  +     ++A +G
Sbjct: 267 NQLIRQGACLVQSVQQIHQELKNALTWSLSEQVPYQATLFSAVQSD-EELPFPELLANVG 325

Query: 317 PVAVAVDEIIRLSGLSPAIVQTVLLELELAGGLERQAGGRV 357
             A  +D +   + +    +   LLELEL G +    GG +
Sbjct: 326 IEATPIDILASRTQIPVQDIMMQLLELELLGHVVAVPGGYI 366