Pairwise Alignments

Query, 400 a.a., Phage integrase from Sphingobium sp. HT1-2

Subject, 439 a.a., Integrase from Pseudomonas fluorescens FW300-N2E2

 Score =  253 bits (647), Expect = 6e-72
 Identities = 153/395 (38%), Positives = 213/395 (53%), Gaps = 16/395 (4%)

Query: 11  AKPREKPYKLADGHGLYLLVTPQGGRYWRMNYRF-DGKAKTMAMGVFPLITLAEAREKRE 69
           AKPR K Y L DG GL+LLV   G + WR  Y+   GK      G +P + L  AR +R 
Sbjct: 16  AKPRAKDYTLFDGQGLFLLVRATGTKVWRFKYKKPSGKPGLATFGNYPALGLKAARARRA 75

Query: 70  DARKLLAAGSDPCAKRKEIEAQEAFEATTGFRIVAEEWLAKREREGLGDITIGKIKWLLE 129
           DA +LLA G DP    K+ + + A EA   F  +A EW A    +   D  +  +K +  
Sbjct: 76  DALELLAHGQDPIESAKQAKIEAANEAGNTFEALALEWHASMAGKWSKDHAVRVLKEIEV 135

Query: 130 FAYPSLGDRKIGEITSMELLAVLRQVEGRGRHETARRLRSVCGRVFRYAIATGRAEHDLS 189
             +P LG R + ++ + +LLA L+ VE RG  +   RLR     + R A+      ++ +
Sbjct: 136 DLFPMLGKRPVSDLKTRDLLACLKTVEKRGALDVVGRLRQRIAGIMRIAVQRNFIVYNPA 195

Query: 190 ANLRDALTTPKVKHLAAITSSQQVGPLLRAIDGFDGHAVTKAALRLAPHVFVRPGELRHA 249
            +L     T K KH  A+   +++  LL+  +   G  +T  A+ LA  VF+R  ELR A
Sbjct: 196 LDLVGGTATRKTKHRPAL-PLERLPELLQRCEADTGRPLTCLAVSLALLVFIRSSELRFA 254

Query: 250 EWPEIDFEKALWSIPAEK------------MKMRRPHRVPLSRQSLTILSSIREVTGAGK 297
            W E DF +++W+IP E+             KM  PH VPLSRQ+L +L  IR ++G   
Sbjct: 255 RWSEFDFTRSMWTIPGERAPIEGVKRSHRGAKMGTPHLVPLSRQTLEVLEQIRRLSGRFD 314

Query: 298 FVFPGFQSLKRPMSENALNGALRRLGYSGD-EMTSHGFRAMASTLLNEMGKWHPDAIERQ 356
            V PG     RPMSEN +N +LRR+GY    E+  HGFR MA + L E G W  DA+ERQ
Sbjct: 315 LVLPGDHYYWRPMSENTVNKSLRRMGYDTKIEVCGHGFRTMACSALVESGLWSRDAVERQ 374

Query: 357 LAHAEADAVRRAYA-RGEYWEERVVMMQAWSDYLD 390
           ++H E + VR AY  + E+ EER +MM  W+DYLD
Sbjct: 375 MSHQERNGVRAAYIHKAEHLEERRLMMTWWADYLD 409