Pairwise Alignments

Query, 203 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 2e-26
 Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 10/204 (4%)

Query: 3   MIAKLKGRLDSTGIDHAIIDVGGVGYLVGASSRTLAALGPVGEAVTIHTEMLVAEDSIRL 62
           MI +L+G L        +I+VGG+GY V      +  L  +GE   I+T  +V ED+  L
Sbjct: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60

Query: 63  VGFARAEERDWYRLLTHVQGVGSRVALAILSALEPLELHRAIMMGDKAMIARANGVGPKL 122
            GF    ER  +R +    GVG ++ LAILS +   +    +   D + + +  GVG K 
Sbjct: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120

Query: 123 AQRIVNELKDKIGAAPAGAPGMPGVVALPTGSFAA-------DALSALQNLGFKPAEASG 175
           A+R+V E+KD++    AG    P   A P  S          +A+SAL  LG+KP +AS 
Sbjct: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180

Query: 176 AVAAAEEELGDGASLDALVRLALR 199
           AV+   +    G S + L+R AL+
Sbjct: 181 AVSQVAKA---GMSSEELIREALK 201