Pairwise Alignments

Query, 1147 a.a., Chromosome partition protein smc from Sphingobium sp. HT1-2

Subject, 1142 a.a., chromosome segregation protein SMC (RefSeq) from Shewanella sp. ANA-3

 Score =  389 bits (998), Expect = e-112
 Identities = 334/1182 (28%), Positives = 561/1182 (47%), Gaps = 76/1182 (6%)

Query: 1    MQIKRLKLSGFKSFVDATELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG 60
            M++K++KL+GFKSFVD T++     L+ I+GPNGCGKSN+++A+RWV+GESSAK +RG  
Sbjct: 1    MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60

Query: 61   MEDVIFAGTTSRPQRDFAEVSLLTIQEQGELFNAVDVGADGELEVTRRIERGAGSAYRAN 120
            M DVIF G+++R     A V L+   ++G L  A    +  E+ V R++ R   S Y  N
Sbjct: 61   MSDVIFNGSSARKPVSVAGVELVFENKEGRL--AGQYASYEEISVKRQVSRDGESWYFLN 118

Query: 121  GKDVRAKDVALIFADAATGAHSPALVSQGRIAAVIAARPQERRAMLEEAAGIAGLHVRRK 180
            G+  R KD+  +F     G  S A++ QG I+ +I ++PQ+ R  +EEAAGI+    RR+
Sbjct: 119  GQKCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRR 178

Query: 181  DAEQKLRAAEGNLARLDEILADMDSRAGNLRRQARAAERYIRLSEQIRIAEGRVIFARWR 240
            + E ++R    NL RL +I +++  +   L +QA+AA++Y  L +  R     ++  R++
Sbjct: 179  ETENRIRHTRENLERLGDIRSELAKQLEKLSQQAKAAKQYRELKQAERKTHAELLVMRYQ 238

Query: 241  EANASAEAARAEAKLAEATVGAAQEALTAANAHSGAAVTALAERRAEALATRDAASESGH 300
            E  +   +   +    E    AAQ         S      L++   +     +A   +G 
Sbjct: 239  ELQSQMASLSEQISSLELQQAAAQSLAQTGELESTELQLKLSQLAEQEQQAVEAYYLTGT 298

Query: 301  QLNTLKAERDGVVRRLHDLAQQAARLDEDREREGTLANDAAEAIARLTAEVASLKGRIAE 360
            ++  L+ +     +R   L  Q  +L E   +          +   L AE++ L  +   
Sbjct: 299  EIAKLEQQLQSQKQRDAQLHNQLEQLSEQIIQNQAKLAAYQASFQALEAELSQLAPQHEL 358

Query: 361  TEAMRPDFAAR----IARAEDGARDAELDLAKAMAKQAGEQAELRVAEAA----LAAARD 412
             + M  +  A+    ++R+E  +  A + LA A+A Q   Q EL  ++ A    L A + 
Sbjct: 359  QQEMMDELQAQWEMSVSRSEAQSESARV-LAAAVA-QHKLQLELHRSKLAHQQQLNAHKT 416

Query: 413  RLGRAEQA------MRRLEGEAAALPDAAPLEAKRDEAAAAQVRANADREAAEAAIATAE 466
            +L + +Q          LE  +A+L D      + ++A A QV  N   +  E+ +A   
Sbjct: 417  QLHQEQQQELASLNAHALEDNSASLNDEI---TQLEQALAEQVEIN---QGFESTLAAVT 470

Query: 467  TERQVASEARASAEAALASARAALAALDSEATALRKAIDASGSGRARALDQLKAAPGYER 526
                VA          L S RA    ++       +  D     + +    ++   G+E 
Sbjct: 471  HTLDVARGEFEQLSQRLTSMRARFELVEQWLAKQEELSD-----KPQLWQSIQVENGWEA 525

Query: 527  ALAAALGDDLEAPIGAEGPRRWAGAEALKDDPGLPDGASPLTAHVT-APEALARRLAQVA 585
            A   AL   +  P+G         A+A        DG+  L A +  AP     + A   
Sbjct: 526  AAELALQGLMTLPVGVNANEIGFYADAALSADVHLDGSPILDAKLNLAPWLKGLKWADNL 585

Query: 586  LVESDKGQALQVGQRLVTLDGQLRRWDGYVAVEGGAAAAERLIRINRLEAIDATRPAAAQ 645
                 +  +L   +R+VT DG L      +A +  +   + L+++++ +           
Sbjct: 586  ASAQAQLPSLAADERIVTADGYLLGKGFLIAKQDNS---QSLVQLSKEQT---------- 632

Query: 646  AVDAAQAEQAEAGAREKAAVEALAAGRTKLGDA-DQRLRAALRAADEAAGALERLSGKRE 704
             +  A AE  +A A ++A ++ LA   T++ D+  Q  +   +   + A    +L+    
Sbjct: 633  QLSEAIAECEQAKAIQQAKLDELAQQLTQVRDSLSQGTKRLHQLQLDKATKSTQLNNAEA 692

Query: 705  AIEERLAEARRDQGAVQAEHDKASAARAA-----LPDGAETRAQV--AALSQASEKARMA 757
              ++R  EA+R Q A      +A  A  A     L +  +  A+    +L Q  ++++ A
Sbjct: 693  QAKQR--EAKRGQLAETVARTQAELAELAEQLMLLAEQEDELAEALEVSLEQQQQQSQDA 750

Query: 758  VSQLQADQALADRALSSDRERMAAADAEAKGWNTRAGEAAKRIAAMASRGETVVQER--- 814
               +   QAL  +   ++R R+A+ +A  +   TR   + ++I     R   +V  +   
Sbjct: 751  QGDMARHQALKAQIGDAER-RLASLNASLQSVTTRMAVSTEQIELQRVRVSELVHSKETL 809

Query: 815  -------AAIEGQPEA--LGTSIATLTEEREAQVERAEQARRAEIEAEATLKAAEKRAAD 865
                   AA EG  +   L   +A L  +++ Q +  +  R  +     TL +   +   
Sbjct: 810  SAQLANVAAQEGDQQTVQLSEQLAQLLNQQQGQQQALKSLRSQQSSLTETLNSIGLKQKQ 869

Query: 866  AGEALAGAREARATAVARAEAAD-ERRIETNRLSGERFECPPPVLPEKLGFPSADIRTAQ 924
                L G  ++ +T   R E    +   +   LS ++      VL + +    AD     
Sbjct: 870  ELGKLEGLTQSLSTLKLRREGLKGQADSQLAALSEQQI-----VLAQIVDSLPADGHP-D 923

Query: 925  SEQAEHDRLSAERERIGPVNLVAAQELEELETIQATSRAESAELTQAINQLRGSIGSLNR 984
              Q + D++  +  R+G +NL A +E E+    ++    +  +L   +  L  +I  +++
Sbjct: 924  KWQRDLDQIRQKIIRLGAINLAAIEEFEQQSERKSYLDHQDEDLNNGLATLEEAIRKIDK 983

Query: 985  EGRQRLLAAFEAVDGHFRRLFTTLFNGGQAHLELIDSDDPLEAGLEIMAQPPGKKLAALT 1044
            E R R    F+AV+    RLF  +F GG+A+L L + DD LE G+ IMAQPPGKK + + 
Sbjct: 984  ETRTRFKTTFDAVNEDLGRLFPKVFGGGRAYLALTE-DDLLETGVTIMAQPPGKKNSTIH 1042

Query: 1045 LLSGGEQALTAVALIFGLFLTNPAPICVLDEVDAPLDDANVERFCDLLDAMVAQTRTRYL 1104
            LLSGGE+ALTA++L+F +F  NPAP C+LDEVDAPLDDANVERFC LL  M      +++
Sbjct: 1043 LLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVERFCRLLKEM--SQSVQFI 1100

Query: 1105 IVTHNAVSMARMHRLFGVTMVERGVSRLVSVNLHGAEALLAA 1146
             ++HN ++M    +L GVTM E GVSR+V+V+L  A A+  A
Sbjct: 1101 YISHNKITMEMADQLIGVTMHEPGVSRIVAVDLEQAVAMADA 1142