Pairwise Alignments

Query, 497 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Sphingobium sp. HT1-2

Subject, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  238 bits (608), Expect = 2e-67
 Identities = 161/442 (36%), Positives = 233/442 (52%), Gaps = 30/442 (6%)

Query: 28  SVSELSGLLKRTVEDRFGHVRLRGEISGFKRAASGHLYLALKDDNAVLDGVMWKGGAQRL 87
           +VS L+  ++  +E+  G V L GEIS F    SGH YL LKD  A +   M+KG  + +
Sbjct: 12  TVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKGNNRLV 71

Query: 88  AFQPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKLKAKLAAEGLFNRD 147
            F+PQ+G +V+   +L+ Y  R  YQI+++ M+  G+G L    E+LK +LAAEGLF + 
Sbjct: 72  NFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEGLFAQT 131

Query: 148 RKRRLPFLPRTIGVVTSPTGAVIRDILHRLADRCPT-QVLLWPVLVQGQGAAEQIARAVR 206
           RK+ LP  PR +G++TS TGA + DILH L  R P   V+++P LVQG+ AA QIA+A+ 
Sbjct: 132 RKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQIAQAI- 190

Query: 207 GFSAMDGSGPLPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAECSIPTISAVGHETDTTL 266
                  +      D++IV RGGGS+EDLW FN EIV R +A   IP ISAVGHE D T+
Sbjct: 191 -----GRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTI 245

Query: 267 CDYAADMRAPTPTAAAEMAVPVRAELLAMLGEMGLRSGRAVRRG-AMQARERLDMQARL- 324
            D+ AD+RAPTP+AAAE+           L +   +    +R   A Q  +   +Q +L 
Sbjct: 246 ADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKLD 305

Query: 325 MPTPDTLLAPQRQRLDLLSDGLNSGLRHRLADARAHLGQVSGALR----PALLRQYVSRA 380
              P   L  Q+Q+LD LS  L   ++ RLA  +    ++S  +       L+RQ     
Sbjct: 306 KQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNL 365

Query: 381 AERVDRLRLRPDYLTRVYRDRATAFDRLSRLFTSVNPDLPLQRGF--------------A 426
            ++  R+      + R           LS    +V+P   L RG+              A
Sbjct: 366 IQQEQRIN---QSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSA 422

Query: 427 RVMAGDRLVRSVVDAQAAGQVS 448
           +V  GD LV  ++D +    V+
Sbjct: 423 QVKPGDTLVTQLMDGEILSTVN 444